RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 RPF2Q9H7B2 306 aaKnown RBP21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 MTRRQ9UBK8 725 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 PKP3Q9Y446 797 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 ZNF711Q9Y462 761 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 PCDHB1Q9Y5F3 818 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 EI24O14681 340 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 PRMT5O14744 637 aaPredicted RBP21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 GPR39O43194 453 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 IRF1P10914 325 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 SBSNQ6UWP8 590 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 FRA10AC1Q70Z53 315 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 LPCAT2Q7L5N7 544 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 GOLGA7Q7Z5G4 137 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 ZNF786Q8N393 782 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 METTL6Q8TCB7 284 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 ADAMTS16Q8TE57 1224 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 ABTB1Q969K4 478 aaPredicted RBP21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 BIRC7Q96CA5 298 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 MRPL9Q9BYD2 267 aaKnown RBP21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 STARD7Q9NQZ5 370 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 USP22Q9UPT9 525 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 SH3GLB1Q9Y371 365 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 SLC30A1Q9Y6M5 507 aa21.34■■□□□ 1.01
SH2D3A-201ENST00000245908 ARNTLO00327 626 aa21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 GALK1P51570 392 aa21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 TWF1Q12792 350 aa21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 TMED1Q13445 227 aa21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 ERI1Q8IV48 349 aaKnown RBP21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 RPL10LQ96L21 214 aaKnown RBP21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 KLF16Q9BXK1 252 aaPredicted RBP21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 TRPM5Q9NZQ8 1165 aa21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 ZNF639Q9UID6 485 aa21.33■■□□□ 1.01
SH2D3A-201ENST00000245908 PLXNA4Q9HCM2 1894 aa21.33■■□□□ 1
SH2D3A-201ENST00000245908 OR7A17O14581 309 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 LSM1O15116 133 aaKnown RBP21.32■■□□□ 1
SH2D3A-201ENST00000245908 LDLRP01130 860 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 RPL17P18621 184 aaKnown RBP21.32■■□□□ 1
SH2D3A-201ENST00000245908 RPL10P27635 214 aaKnown RBP21.32■■□□□ 1
SH2D3A-201ENST00000245908 OR4D2P58180 307 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 INO80DQ53TQ3 878 aaPredicted RBP21.32■■□□□ 1
SH2D3A-201ENST00000245908 IL27RAQ6UWB1 636 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 DLEU7Q6UYE1 221 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 OSCP1Q8WVF1 389 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 EID2BQ96D98 161 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 RNF38Q9H0F5 515 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 ACTL8Q9H568 366 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 PCDHB3Q9Y5E6 796 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 TMEM221A6NGB7 291 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 GOLGA8CPA6NN73 597 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 HOXA2O43364 376 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 PRAMEF12O95522 483 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 OR1D2P34982 312 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 HMGCLP35914 325 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 CBX3Q13185 183 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 GTF2H2Q13888 395 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 C18orf21Q32NC0 220 aaPredicted RBP21.32■■□□□ 1
SH2D3A-201ENST00000245908 GTF2H2CQ6P1K8 395 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 CERS6Q6ZMG9 384 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 CRIPAKQ8N1N5 446 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 CHCHD4Q8N4Q1 142 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 OR4F6Q8NGB9 312 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 MAGEE1Q9HCI5 957 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 SMPD3Q9NY59 655 aaPredicted RBP21.32■■□□□ 1
SH2D3A-201ENST00000245908 MAGEL2Q9UJ55 1249 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 PCDHB9Q9Y5E1 797 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 CROCCQ5TZA2 2017 aa21.32■■□□□ 1
SH2D3A-201ENST00000245908 TBKBP1A7MCY6 615 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 IFRD1O00458 451 aaPredicted RBP21.31■■□□□ 1
SH2D3A-201ENST00000245908 ANKRD28O15084 1053 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 S100BP04271 92 aaPredicted RBP21.31■■□□□ 1
SH2D3A-201ENST00000245908 CAPGP40121 348 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 CYP20A1Q6UW02 462 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 LYSMD3Q7Z3D4 306 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 PDPRQ8NCN5 879 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 FNDC8Q8TC99 324 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 CYGBQ8WWM9 190 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 GPR63Q9BZJ6 419 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 ARVCFO00192 962 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 CLOCKO15516 846 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 SEC24AO95486 1093 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 G6PDP11413 515 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 RPS3P23396 243 aaKnown RBP eCLIP21.31■■□□□ 1
SH2D3A-201ENST00000245908 MZF1P28698 734 aaPredicted RBP21.31■■□□□ 1
SH2D3A-201ENST00000245908 SOX11P35716 441 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 ARL1P40616 181 aaPredicted RBP21.31■■□□□ 1
SH2D3A-201ENST00000245908 RPS9P46781 194 aaKnown RBP21.31■■□□□ 1
SH2D3A-201ENST00000245908 RHOAP61586 193 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 NR6A1Q15406 480 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 DHRSXQ8N5I4 330 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 ZNF513Q8N8E2 541 aaPredicted RBP21.31■■□□□ 1
SH2D3A-201ENST00000245908 BPIFB1Q8TDL5 484 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 FBXL20Q96IG2 436 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 STOML2Q9UJZ1 356 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 FADS3Q9Y5Q0 445 aa21.31■■□□□ 1
SH2D3A-201ENST00000245908 RAD51BO15315 384 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 FFAR2O15552 330 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 ALDH1A1P00352 501 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 OTCP00480 354 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 TRAF3Q13114 568 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 CYBRD1Q53TN4 286 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms