RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 KATNA1O75449 491 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 CNPP09543 421 aaKnown RBP18.45■□□□□ 0.54
CPSF3-201ENST00000238112 HMOX2P30519 316 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 FLT3LGP49771 235 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 ALDH3A2P51648 485 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 CLCN7P51798 805 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 CHRNB3Q05901 458 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 SMARCB1Q12824 385 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 PWP1Q13610 501 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 GTF2H2Q13888 395 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 C16orf72Q14CZ0 275 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 PTPRRQ15256 657 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 PCBP2Q15366 365 aaKnown RBP eCLIP18.45■□□□□ 0.54
CPSF3-201ENST00000238112 ZIK1Q3SY52 487 aaPredicted RBP18.45■□□□□ 0.54
CPSF3-201ENST00000238112 GTF2H2CQ6P1K8 395 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 TMEM26Q6ZUK4 368 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 ADAMTSL2Q86TH1 951 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 CLEC4FQ8N1N0 589 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 OR4F6Q8NGB9 312 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 DOK1Q99704 481 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 C17orf80Q9BSJ5 609 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 ARHGAP39Q9C0H5 1083 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 ING2Q9H160 280 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 PKP3Q9Y446 797 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 PCDHGA11Q9Y5H2 935 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 VWA8A3KMH1 1905 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 H7C0S8 307 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 OTCP00480 354 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 F11P03951 625 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 CCND3P30281 292 aaPredicted RBP18.45■□□□□ 0.54
CPSF3-201ENST00000238112 DGKQP52824 942 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 FCGRTP55899 365 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 PLIN5Q00G26 463 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 TWF1Q12792 350 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 TRAF2Q12933 501 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 MBTPS1Q14703 1052 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 C18orf21Q32NC0 220 aaPredicted RBP18.45■□□□□ 0.54
CPSF3-201ENST00000238112 TTC30BQ8N4P2 665 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 AADATQ8N5Z0 425 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 FNDC8Q8TC99 324 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 TMBIM1Q969X1 311 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 MUS81Q96NY9 551 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 ACTL8Q9H568 366 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 NTN4Q9HB63 628 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 SLC30A1Q9Y6M5 507 aa18.45■□□□□ 0.54
CPSF3-201ENST00000238112 A0A0U1RQS6 177 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 OR7A17O14581 309 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 GPR39O43194 453 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 KCNH1O95259 989 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 GGT1P19440 569 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 DAG1Q14118 895 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 CHST15Q7LFX5 561 aaPredicted RBP18.44■□□□□ 0.54
CPSF3-201ENST00000238112 OR8J3Q8NGG0 315 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 SDCCAG3Q96C92 435 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 ZBTB18Q99592 522 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 TUBA1CQ9BQE3 449 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 IRAK4Q9NWZ3 460 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 ZNHIT2Q9UHR6 403 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 DHRS7Q9Y394 339 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 A0A1B0GVM2 712 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 PRMT5O14744 637 aaPredicted RBP18.44■□□□□ 0.54
CPSF3-201ENST00000238112 GSTA4O15217 222 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 GJB5O95377 273 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 PCNAP12004 261 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 ATF6P18850 670 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 JAK1P23458 1154 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 SGSHP51688 502 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 CACNG1Q06432 222 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 ABRAXAS2Q15018 415 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 RNF219Q5W0B1 726 aaPredicted RBP18.44■□□□□ 0.54
CPSF3-201ENST00000238112 STK32CQ86UX6 486 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 PDLIM5Q96HC4 596 aaKnown RBP18.44■□□□□ 0.54
CPSF3-201ENST00000238112 PPP3R2Q96LZ3 170 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 P2RY12Q9H244 342 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 IPPKQ9H8X2 491 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 ST14Q9Y5Y6 855 aa18.44■□□□□ 0.54
CPSF3-201ENST00000238112 CHD5Q8TDI0 1954 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 FRMPD3Q5JV73 1810 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 RAD51BO15315 384 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 ALDH2P05091 517 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 THRBP10828 461 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 ELK4P28324 431 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 CST5P28325 142 aaPredicted RBP18.43■□□□□ 0.54
CPSF3-201ENST00000238112 MTHFRP42898 656 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 GPR162Q16538 588 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 RFTN2Q52LD8 501 aaPredicted RBP18.43■□□□□ 0.54
CPSF3-201ENST00000238112 PTRHD1Q6GMV3 140 aaKnown RBP18.43■□□□□ 0.54
CPSF3-201ENST00000238112 FUT10Q6P4F1 479 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 ZNF773Q6PK81 442 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 LINGO4Q6UY18 593 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 C16orf59Q7L2K0 433 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 MILR1Q7Z6M3 343 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 TTC16Q8NEE8 873 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 FIG4Q92562 907 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 TTLL2Q9BWV7 592 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 TMEM161AQ9NX61 479 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 ZMYM5Q9UJ78 669 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 PCDHB1Q9Y5F3 818 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 A0A1W2PPW3 197 aa18.43■□□□□ 0.54
CPSF3-201ENST00000238112 SH3PXD2BA1X283 911 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms