RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ARSDP51689 593 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 ARL4CP56559 192 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CRADDP78560 199 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 PLOD1Q02809 727 aaPredicted RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CAV1Q03135 178 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 C2orf54Q08AI8 447 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 DMPKQ09013 629 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 THOC5Q13769 683 aaKnown RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 HLTFQ14527 1009 aaKnown RBP eCLIP11.09□□□□□ -0.632e-9■□□□□ 11.3
SF3B6-201ENST00000233468 SMAD1Q15797 465 aaKnown RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 KIAA0930Q6ICG6 404 aaPredicted RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 WASH2PQ6VEQ5 465 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 PACS1Q6VY07 963 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 DET1Q7L5Y6 550 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CTAGE6Q86UF2 777 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 LRRC6Q86X45 466 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CTAGE4Q8IX94 777 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 RBM12BQ8IXT5 1001 aaKnown RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CEP112Q8N8E3 955 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 KYQ8NBH2 561 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 OR2L2Q8NH16 312 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CALML6Q8TD86 181 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 GRAMD1AQ96CP6 724 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 LRRC39Q96DD0 335 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 SGF29Q96ES7 293 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 STAMBPL1Q96FJ0 436 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 TCF12Q99081 682 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 WASH6PQ9NQA3 447 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 SPATS2LQ9NUQ6 558 aaKnown RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 WHRNQ9P202 907 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 DKK4Q9UBT3 224 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 SLC2A6Q9UGQ3 507 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 ACSL5Q9ULC5 683 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 KCNK6Q9Y257 313 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 RPS6KL1Q9Y6S9 549 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 HELZ2Q9BYK8 2649 aaKnown RBP11.08□□□□□ -0.64
SF3B6-201ENST00000233468 ANKRD36A6QL64 1941 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 TMX2-CTNND1H3BSU7 103 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 GPR39O43194 453 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 NOBOXO60393 691 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 NDUFS3O75489 264 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 TCEA3O75764 348 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 VAPBO95292 243 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 IVDP26440 423 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 ITPKBP27987 946 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 NMBRP28336 390 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 MAGEA3P43357 314 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 PRLHRP49683 370 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 CTSCP53634 463 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 ITGA8P53708 1063 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 DBN1Q16643 649 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 HIF1AQ16665 826 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 CLPPQ16740 277 aaPredicted RBP11.08□□□□□ -0.64
SF3B6-201ENST00000233468 PLA2G4EQ3MJ16 856 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 KHDC1Q4VXA5 237 aaKnown RBP11.08□□□□□ -0.64
SF3B6-201ENST00000233468 AGAP9Q5VTM2 703 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 HIBCHQ6NVY1 386 aaPredicted RBP11.08□□□□□ -0.64
SF3B6-201ENST00000233468 C8orf74Q6P047 294 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 GUSBP11Q6P575 273 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 IYDQ6PHW0 289 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 TMEM135Q86UB9 458 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 C17orf82Q86X59 251 aaPredicted RBP11.08□□□□□ -0.64
SF3B6-201ENST00000233468 ZNF547Q8IVP9 402 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 TRIM48Q8IWZ4 208 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 CACTIN-AS1Q8N1I8 211 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 SFRP1Q8N474 314 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 ARL14Q8N4G2 192 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 HM13Q8TCT9 377 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 MFSD3Q96ES6 412 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 ZNF778Q96MU6 729 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 TRIM51Q9BSJ1 452 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 CCM2Q9BSQ5 444 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 TRIM31Q9BZY9 425 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 CAAP1Q9H8G2 361 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 SARS2Q9NP81 518 aaKnown RBP11.08□□□□□ -0.64
SF3B6-201ENST00000233468 LRIT1Q9P2V4 623 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 DNAJC16Q9Y2G8 782 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 PLEKHM1Q9Y4G2 1056 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 MRFAP1Q9Y605 127 aa11.08□□□□□ -0.64
SF3B6-201ENST00000233468 PTPRQQ9UMZ3 2332 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 LY6G6EA0A0G2JKS1 128 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 H3BMM5 538 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 PRMT5O14744 637 aaPredicted RBP11.07□□□□□ -0.64
SF3B6-201ENST00000233468 RAD51CO43502 376 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 OPA1O60313 960 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 ZIC2O95409 532 aaPredicted RBP11.07□□□□□ -0.64
SF3B6-201ENST00000233468 VIPP01282 170 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 PRB1P04280 392 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 JUPP14923 745 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 OGNP20774 298 aaKnown RBP11.07□□□□□ -0.64
SF3B6-201ENST00000233468 FASLGP48023 281 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 RPA4Q13156 261 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 LONRF1Q17RB8 773 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 BBS9Q3SYG4 887 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 ANKRD20A4Q4UJ75 823 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 GLE1Q53GS7 698 aaKnown RBP11.07□□□□□ -0.64
SF3B6-201ENST00000233468 NEPROQ6NW34 567 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 ABRAXAS1Q6UWZ7 409 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 C11orf96Q7Z7L8 435 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms