RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 TEX37Q96LM6 180 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TUBA1CQ9BQE3 449 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 COPS4Q9BT78 406 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 MROQ9BYG7 248 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 YTHDF1Q9BYJ9 559 aaKnown RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 GSTO2Q9H4Y5 243 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 REEP1Q9H902 201 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 PCDHGA11Q9Y5H2 935 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TSPAN1O60635 241 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 GSTM2P28161 218 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 IFNA8P32881 189 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 EMX1Q04741 257 aaPredicted RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 INCA1Q0VD86 236 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 CATSPERGQ6ZRH7 1159 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 LARP4Q71RC2 724 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 CIR1Q86X95 450 aaPredicted RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 FAM83FQ8NEG4 500 aaPredicted RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TMEM125Q96AQ2 219 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 LINGO1Q96FE5 620 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 ZBTB20Q9HC78 741 aaPredicted RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 IGSF5Q9NSI5 407 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 ARIH1Q9Y4X5 557 aaPredicted RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TBKBP1A7MCY6 615 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 CYP11A1P05108 521 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TGFB3P10600 412 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 HMGB2P26583 209 aaKnown RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 RENBPP51606 427 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 CREB5Q02930 508 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 SELPLGQ14242 412 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 PAFAH1B3Q15102 231 aaKnown RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 ZDHHC21Q8IVQ6 265 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 LPCAT1Q8NF37 534 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 HDAC2Q92769 488 aaKnown RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 PTERQ96BW5 349 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 CSF3RQ99062 836 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TMEM161AQ9NX61 479 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 MALT1Q9UDY8 824 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 SMIM28A0A1B0GU29 152 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 SYNDIG1LA6NDD5 238 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 CD40LGP29965 261 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 ADCYAP1R1P41586 468 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 GRIK4Q16099 956 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 GTDC1Q4AE62 458 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 PDZK1Q5T2W1 519 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 FAM86B1Q8N7N1 296 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 ENKURQ8TC29 256 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 SLC22A17Q8WUG5 538 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TANKQ92844 425 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 OTULINQ96BN8 352 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 CEP295NLQ96MC4 621 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TOR4AQ9NXH8 423 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 ANKMY1Q9P2S6 941 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TMEM98Q9Y2Y6 226 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 M0QZ92 97 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 NBNO60934 754 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 S100A3P33764 101 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 KRR1Q13601 381 aaKnown RBP14.35□□□□□ -0.11
PRDM4-201ENST00000228437 KLHL17Q6TDP4 642 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 MINDY1Q8N5J2 469 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 CELF2-AS1Q8N7Q2 184 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 ASCC1Q8N9N2 400 aaKnown RBP14.35□□□□□ -0.11
PRDM4-201ENST00000228437 CHDHQ8NE62 594 aaPredicted RBP14.35□□□□□ -0.11
PRDM4-201ENST00000228437 YME1L1Q96TA2 773 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 RMND5AQ9H871 391 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 TIGARQ9NQ88 270 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 SPEF1Q9Y4P9 236 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 MAST2Q6P0Q8 1798 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 DCLK1O15075 740 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 TMCC2O75069 709 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 SEMA3DO95025 777 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 SELENBP1Q13228 472 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 TIGD7Q6NT04 549 aaPredicted RBP14.35□□□□□ -0.11
PRDM4-201ENST00000228437 DHRS4L2Q6PKH6 230 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 BLOC1S3Q6QNY0 202 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 RASAL3Q86YV0 1011 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 MMAAQ8IVH4 418 aaKnown RBP14.35□□□□□ -0.11
PRDM4-201ENST00000228437 SCAMP5Q8TAC9 235 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 GPR152Q8TDT2 470 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 DHRS1Q96LJ7 313 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 Q96MT0 163 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 ASB2Q96Q27 587 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 VRTNQ9H8Y1 702 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 AGO3Q9H9G7 860 aaKnown RBP14.35□□□□□ -0.11
PRDM4-201ENST00000228437 ENPP5Q9UJA9 477 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 FBXW11Q9UKB1 542 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 A0A1W2PQ72 361 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 ANKRD34BA5PLL1 514 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 ADM5C9JUS6 153 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 PRMT5O14744 637 aaPredicted RBP14.35□□□□□ -0.11
PRDM4-201ENST00000228437 HSD17B1P14061 328 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 CYP4F8P98187 520 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 CLCA4Q14CN2 919 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 TAF12Q16514 161 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 ADPRMQ3LIE5 342 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 DCAF4L1Q3SXM0 396 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 SYCE2Q6PIF2 218 aa14.35□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF605Q86T29 641 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms