RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ITIH4Q14624 930 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 RPE65Q16518 533 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 MAP9Q49MG5 647 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 FASTKD1Q53R41 847 aaKnown RBP12.43□□□□□ -0.42
LSM5-201ENST00000223084 C3orf38Q5JPI3 329 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 AGAP9Q5VTM2 703 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 IZUMO3Q5VZ72 239 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 METRNLQ641Q3 311 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 ZNF574Q6ZN55 896 aaPredicted RBP12.43□□□□□ -0.42
LSM5-201ENST00000223084 ZCCHC14Q8WYQ9 949 aaKnown RBP12.43□□□□□ -0.42
LSM5-201ENST00000223084 PEX13Q92968 403 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 CXorf40BQ96DE9 158 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 LINC00615Q96LM1 132 aaPredicted RBP12.43□□□□□ -0.42
LSM5-201ENST00000223084 CCM2Q9BSQ5 444 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 TRIM31Q9BZY9 425 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 WWP1Q9H0M0 922 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 SEMA6CQ9H3T2 930 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 STN1Q9H668 368 aaKnown RBP12.43□□□□□ -0.42
LSM5-201ENST00000223084 CCDC86Q9H6F5 360 aaKnown RBP12.43□□□□□ -0.42
LSM5-201ENST00000223084 XAB2Q9HCS7 855 aaKnown RBP12.43□□□□□ -0.42
LSM5-201ENST00000223084 CATSPERZQ9NTU4 200 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 IL1RAPL1Q9NZN1 696 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 TMEM9Q9P0T7 183 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 CFAP20Q9Y6A4 193 aaKnown RBP12.43□□□□□ -0.42
LSM5-201ENST00000223084 AK5Q9Y6K8 562 aa12.43□□□□□ -0.42
LSM5-201ENST00000223084 SDR42E2A6NKP2 422 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 CCDC188H7C350 402 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 CD3EAPO15446 510 aaKnown RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 BANF1O75531 89 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 AP2A2O94973 939 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 VAPBO95292 243 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 ITGB6P18564 788 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 HALP42357 657 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 NSG1P42857 185 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 MAGEA3P43357 314 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 INHBCP55103 352 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 ZFP36L1Q07352 338 aaKnown RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 ZNF658BQ4V348 819 aaPredicted RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 LYPLAL1Q5VWZ2 237 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 DUS1LQ6P1R4 473 aaKnown RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 FOXR1Q6PIV2 292 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 PACS1Q6VY07 963 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 NAPRTQ6XQN6 538 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 TMEM26Q6ZUK4 368 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 PIM3Q86V86 326 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 SLITRK4Q8IW52 837 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 OTUD6BQ8N6M0 293 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 GPR150Q8NGU9 434 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 HM13Q8TCT9 377 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 JPH3Q8WXH2 748 aaPredicted RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 SH3KBP1Q96B97 665 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 NXPE2Q96DL1 559 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 AHCYL2Q96HN2 611 aaKnown RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 SGSM3Q96HU1 749 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 RMDN2Q96LZ7 410 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 PWWP2AQ96N64 755 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 RUNDC3BQ96NL0 473 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 FCRL3Q96P31 734 aaPredicted RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 INSM2Q96T92 566 aaPredicted RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 NRSN2Q9GZP1 204 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 EPB41L5Q9HCM4 733 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 SAMD15Q9P1V8 674 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 SATB2Q9UPW6 733 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 MAD1L1Q9Y6D9 718 aa12.42□□□□□ -0.42
LSM5-201ENST00000223084 URB1O60287 2271 aaKnown RBP12.42□□□□□ -0.42
LSM5-201ENST00000223084 TAF4O00268 1085 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 ZW10O43264 779 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 BRINP1O60477 761 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 CPNE6O95741 557 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 F7P08709 466 aaPredicted RBP12.41□□□□□ -0.42
LSM5-201ENST00000223084 TYRP1P17643 537 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 PDHA2P29803 388 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 PREPP48147 710 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 ARCN1P48444 511 aaKnown RBP12.41□□□□□ -0.42
LSM5-201ENST00000223084 GABREP78334 506 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 GPR18Q14330 331 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 RTP5Q14D33 572 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 BRD3Q15059 726 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 ANKRD20A4Q4UJ75 823 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 MSS51Q4VC12 460 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 PHF19Q5T6S3 580 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 CERS6Q6ZMG9 384 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 SYDE1Q6ZW31 735 aaPredicted RBP12.41□□□□□ -0.42
LSM5-201ENST00000223084 KDF1Q8NAX2 398 aaPredicted RBP12.41□□□□□ -0.42
LSM5-201ENST00000223084 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 OR10G6Q8NH81 332 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 LKAAEAR1Q8TD35 194 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 NCSTNQ92542 709 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 ZNF669Q96BR6 464 aaPredicted RBP12.41□□□□□ -0.42
LSM5-201ENST00000223084 SIGLEC10Q96LC7 697 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 C12orf66Q96MD2 445 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 TMEM74Q96NL1 305 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 TTC1Q99614 292 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.41□□□□□ -0.42
LSM5-201ENST00000223084 ZMYND15Q9H091 742 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 COG4Q9H9E3 785 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 SLC40A1Q9NP59 571 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 POT1Q9NUX5 634 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 IMP3Q9NV31 184 aaKnown RBP12.41□□□□□ -0.42
LSM5-201ENST00000223084 ANAPC5Q9UJX4 755 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms