RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Rpa1Q8VEE4 623 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Nipsnap3bQ9CQE1 247 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 ItpaQ9D892 198 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Nr4a3Q9QZB6 627 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Psmd13Q9WVJ2 376 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Lactbl1S4R213 581 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Fam155bA2BDP1 471 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Mup18A2BIM8 181 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gm6356L7N2A7 188 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Rgs4O08899 205 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Dnajb3O35723 242 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Mup11P04938 181 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 H2-Q7P14429 334 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 H2-Q9P14431 200 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 DtlQ3TLR7 729 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gm21320Q4FZE8 181 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ap5m1Q8BJ63 490 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Slc17a6Q8BLE7 582 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Zc3h3Q8CHP0 950 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Aim2Q91VJ1 354 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 PnckQ9QYK9 343 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 PiggD3Z3Y1 983 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 BC051665E9Q623 330 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 P01668 110 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 UmpsP13439 481 aaKnown RBP9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Guca1aP43081 202 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Cyp2a12P56593 492 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Lypla1P97823 230 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 HdxQ14B70 692 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gpr174Q3U507 335 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 CpQ61147 1061 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 PigaQ64323 485 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 ManeaQ6NXH2 462 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr664Q7TRP5 306 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr594Q7TRR4 311 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr320Q7TRZ4 306 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Zswim5Q80TC6 1188 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Q8BWG4 1187 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Znf628Q8CJ78 1038 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Arhgef3Q91X46 524 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Nme5Q99MH5 211 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Plscr3Q9JIZ9 296 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tnfrsf14A0A1W2P7D5 276 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Fam166bA2AIP0 273 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gm42641I6L9G2 585 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Alas2P08680 587 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Zp3P10761 424 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Kif2aP28740 705 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Psen1P49769 467 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Pim3P58750 326 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 CtrcQ3SYP2 268 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 4930438A08RikQ5SPH3 536 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Stmnd1Q6P3A1 279 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Pcdh19Q80TF3 1145 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Psmd11Q8BG32 422 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 DseQ8BLI4 958 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ulbp1Q8HWA3 334 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gtf2h3Q8VD76 309 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Hdac8Q8VH37 377 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Adgre4Q91ZE5 689 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Rev1Q920Q2 1249 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Phf10Q9D8M7 497 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ccdc70Q9D9B0 223 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Cyp3a44Q9EQW4 504 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Prokr1Q9JKL1 393 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Acsl4Q9QUJ7 711 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Slc25a13Q9QXX4 676 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 RlfA2A7F4 1918 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 CerklA2AQH1 525 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Krt4P07744 525 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Prl3b1P09586 222 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Hoxa9P09631 271 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Slc2a3P32037 493 aaKnown RBP9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Slc10a2P70172 348 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 MybphP70402 483 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Meaf6Q2VPQ9 191 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Rnf223Q3UV31 285 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Plk4Q64702 925 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tmem151bQ68FE7 561 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Strip2Q8C9H6 844 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Rnf222Q8CEF8 211 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Adam32Q8K410 754 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Vmn1r185Q8R299 319 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Chrna3Q8R4G9 499 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Sppl2aQ9JJF9 523 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Fer1l5P0DM40 2038 aa9.78□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Kiaa1522A2A7S8 1013 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr1160A2AVT0 319 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Nt5c1aA3KFX0 365 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Saxo1B1AXP3 476 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tcea3P23881 347 aaKnown RBP9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Kcnj9P48543 393 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Myo1gQ5SUA5 1024 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 PhgdhQ61753 533 aaKnown RBP9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Pced1aQ6P1Z5 449 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Igsf3Q6ZQA6 1194 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Cers6Q8C172 384 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Fam110bQ8C739 366 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 SntnQ8C9X1 147 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Usp45Q8K387 813 aa9.77□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms