RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ankfn1A0A140LIW7 1083 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Rhbdl2A2AGA4 302 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cyp4f17G3UW78 524 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vmn2r21K7N6Y7 853 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vmn2r112L7N221 857 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vmn2r20L7N2B1 853 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sec22bO08547 215 aaKnown RBP6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Galnt4O08832 578 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cyp2j6O54750 501 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 PctpP53808 214 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ptpn5P54830 541 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Lrrn4P59383 733 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Calb2Q08331 271 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 ptchd1Q14B62 888 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Armcx5Q3UZB0 606 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cep295nlQ497N6 533 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zfp280bQ505F4 534 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 CcnjlQ5SRT8 387 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Dhrs13Q5SS80 376 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ostf1Q62422 215 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hs3st2Q673U1 367 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Psd2Q6P1I6 770 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Dnajc15Q78YY6 149 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr1037Q7TR84 321 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Man2a2Q8BRK9 1152 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 MdficQ8BX65 247 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Znf276Q8CE64 614 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Q8CIL4 281 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Lsm14aQ8K2F8 462 aaKnown RBP6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tmem150bQ8R218 238 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vmn1r219Q8R271 312 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 WwoxQ91WL8 414 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cyp4f16Q99N17 524 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Snf8Q9CZ28 258 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Fam173bQ9D1Z3 247 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Slc7a9Q9QXA6 487 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Nr4a3Q9QZB6 627 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 H2afb2S4R1M3 115 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 SptbP15508 2128 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm29554A0A087WNW4 188 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mrgpra2aA0A0R4J1Z0 331 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mcf2A2AEU1 1111 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Patl2A2ARM1 529 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zbed6D2EAC2 980 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr292F8VQ84 308 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vmn2r86G5E8Y4 848 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vmn1r168K7N6B6 309 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hps1O08983 704 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tcea3P23881 347 aaKnown RBP6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vps4bP46467 444 aaKnown RBP6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 MipP51180 263 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gabpb1Q00420 383 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Wdr36Q3TAQ9 899 aaKnown RBP6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Defb48Q3UW22 87 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 AbrQ5SSL4 859 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ptpn21Q62136 1176 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hspbap1Q8BK58 483 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Trmt2bQ8BQJ6 493 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zfp62Q8C827 914 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Adgrg1Q8K209 687 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 ZwilchQ8R060 589 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Dync1li1Q8R1Q8 523 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Rnf8Q8VC56 488 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr1208Q8VG47 308 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Wdr55Q9CX97 388 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Pgm3Q9CYR6 542 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hyal6Q9D4E9 494 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 C1qtnf1Q9QXP7 281 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Akap8lQ9R0L7 642 aaKnown RBP6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gipc2Q9Z2H7 314 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 RttnQ8R4Y8 2226 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Itga9B8JK39 1036 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Bhlhe40O35185 411 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cdk18Q04899 451 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sox4Q06831 440 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hdgfl2Q3UMU9 669 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 NovQ64299 354 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gabra5Q8BHJ7 463 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Elmo2Q8BHL5 732 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mettl21cQ8BLU2 248 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Elmo1Q8BPU7 727 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Pggt1bQ8BUY9 377 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Nt5dc1Q8C5P5 467 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Galnt13Q8CF93 556 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Chrna3Q8R4G9 499 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Laptm4bQ91XQ6 227 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tmem135Q9CYV5 458 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cyp3a44Q9EQW4 504 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mpp5Q9JLB2 675 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mbd4Q9Z2D7 554 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm14862B1AV28 81 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vmn2r34E9PVI0 852 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zscan4bE9Q3G0 505 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vmn2r37F8VQD3 802 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cd151O35566 253 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Dnajb3O35723 242 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hnrnpa2b1O88569 353 aaKnown RBP6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 AldoaP05064 364 aaKnown RBP6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ctla2bP12400 113 aa6.81□□□□□ -1.32
Bdnf-201ENSMUST00000053317 MaxP28574 160 aa6.81□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms