RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Fastkd3Q8BSN9 661 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ifi44Q8BV66 422 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Zfp940Q8R2Q3 566 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Nae1Q8VBW6 534 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Nck1Q99M51 377 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ankrd61Q9CQM6 421 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gbe1Q9D6Y9 702 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Slc13a2Q9ES88 586 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Prl5a1Q9JII2 230 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 SqorQ9R112 450 aa13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 PfkpQ9WUA3 784 aaKnown RBP13.75□□□□□ -0.21
Lime1-201ENSMUST00000048077 Itga8A2ARA8 1062 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ankrd34aB2RW11 495 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Pate3B3GLJ3 98 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Slc28a1E9PXX9 648 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 2210016F16RikG3X8U3 338 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 RfngO09009 332 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Coro1aO89053 461 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Hoxa9P09631 271 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 JundP15066 341 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Prdx3P20108 257 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 EsrrgP62509 458 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ybx1P62960 322 aaKnown RBP13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Il11ra2P70225 432 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Q3KNL4 93 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Krt2Q3TTY5 707 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Zfp560Q3URI6 754 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Olfr325Q5NCD2 326 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 FaddQ61160 205 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Slc13a5Q67BT3 572 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Krt73Q6NXH9 539 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Klhl5Q6PFE1 708 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Znf473Q8BI67 892 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Smarcal1Q8BJL0 910 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Tcam1Q99NB3 548 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Batf3Q9D275 118 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 NvlQ9DBY8 855 aaKnown RBP13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Pkp3Q9QY23 797 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Fhl5Q9WTX7 284 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Dock3Q8CIQ7 2027 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 4933424G06RikA0A140LIP3 267 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 RbpjlO08674 515 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 P01636 108 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 P01878 344 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ptger3P30557 365 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Tmem173Q3TBT3 378 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Lrrc47Q505F5 581 aaKnown RBP13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Trpc1Q61056 793 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Fam181bQ80VF6 417 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 ToporsQ80Z37 1033 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Npas4Q8BGD7 802 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Pcdh20Q8BIZ0 952 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 C5ar2Q8BW93 344 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 BicralQ8CHH5 1074 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Vmn1r18Q8R2C8 299 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Lyrm1Q9CQB7 122 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Cpxm2Q9D2L5 764 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Tchhl1Q9D3P1 638 aa13.74□□□□□ -0.21
Lime1-201ENSMUST00000048077 Kat6aQ8BZ21 2003 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gbf1Q6DFZ1 1861 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gbp11A9YVJ5 442 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gm10715J3QP74 227 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Il1aP01582 270 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 BdnfP21237 249 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gli1P47806 1111 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Patl1Q3TC46 770 aaKnown RBP13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gdpgp1Q3TLS3 386 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Wnt8aQ64527 354 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ints6Q6PCM2 883 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Olfr1036Q7TR85 310 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 PdprQ7TSQ8 878 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Tspan12Q8BKT6 305 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Tmem214Q8BM55 687 aaKnown RBP13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Fignl1Q8BPY9 683 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gm5591Q8CDK1 855 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Olfr606Q8VGZ8 319 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Capn8Q91VA3 703 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ndufs1Q91VD9 727 aaKnown RBP13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Rbm47Q91WT8 590 aaKnown RBP13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 HnrnpabQ99020 285 aaKnown RBP13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Nmd3Q99L48 503 aaKnown RBP13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Idh3aQ9D6R2 366 aaKnown RBP13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Nmnat1Q9EPA7 285 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Nif3l1Q9EQ80 376 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Snap29Q9ERB0 260 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Slc7a9Q9QXA6 487 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Foxe3Q9QY14 288 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Abt1Q9QYL7 269 aaKnown RBP13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Sgk2Q9QZS5 367 aa13.73□□□□□ -0.21
Lime1-201ENSMUST00000048077 Mllt3A2AM29 569 aa13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 Catsperg2C6KI89 1145 aa13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 Acbd4E9Q289 327 aa13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 Rhox6O70238 227 aa13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 Dync1i2O88487 612 aaKnown RBP13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 Dnmt3aO88508 908 aaKnown RBP13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 LdhcP00342 332 aa13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 BrafP28028 804 aa13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 Pxmp2P42925 194 aa13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ap1s1P61967 158 aa13.72□□□□□ -0.21
Lime1-201ENSMUST00000048077 Pde7aP70453 456 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms