RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gatad2aQ8CHY6 629 aaKnown RBP8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Creld1Q91XD7 420 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pcdhga9Q91XX9 932 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cdk9Q99J95 372 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc26a5Q99NH7 744 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Trap1Q9CQN1 706 aaKnown RBP8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Elovl2Q9JLJ4 292 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cdh22Q9WTP5 813 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pdcd7Q9WTY1 482 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Scnn1gQ9WU39 655 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 B4galt6Q9WVK5 382 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Chd7A2AJK6 2986 aaKnown RBP8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cacna1eQ61290 2272 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lrrc10bG3XA50 292 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 H2-M9O19442 342 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ech1O35459 327 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pdlim1O70400 327 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 SagP20443 403 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Traf6P70196 530 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cacna1cQ01815 2139 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fam105aQ3TVP5 353 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Arid5aQ3U108 590 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Defb48Q3UW22 87 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cypt4Q6P925 153 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Med26Q7TN02 588 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Acat3Q80X81 397 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Elmo1Q8BPU7 727 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gpr26Q8BZA7 337 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 LnpepQ8C129 1025 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 P3h2Q8CG71 703 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Sugp1Q8CH02 643 aaKnown RBP8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rmnd1Q8CI78 450 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cops8Q8VBV7 209 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr1311Q8VET0 312 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pofut2Q8VHI3 429 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 PompQ9CQT5 141 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 RtcAQ9D7H3 366 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ifrd2Q9D8U0 441 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Trpc4apQ9JLV2 797 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rbck1Q9WUB0 508 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 CntrlA2AL36 2334 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tex13c2A0A0G2JGA3 530 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Nipsnap3aB1AWZ3 247 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm4871D3Z0W7 314 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prr22F6TNE3 422 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn2r5K7N788 911 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Neurod4O09105 330 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Syn1O88935 706 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Atp1b2P14231 290 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pou4f1P17208 421 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gpr174Q3U507 335 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fzd3Q61086 666 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fastkd1Q6DI86 829 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Kif18bQ6PFD6 834 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Acap2Q6ZQK5 770 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 TifaQ793I8 184 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 R3hcc1lQ8BJM3 775 aaKnown RBP8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tlk1Q8C0V0 766 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cers6Q8C172 384 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm13199Q8C8E0 125 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mark4Q8CIP4 752 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Snrnp27Q8K194 155 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Exd2Q8VEG4 650 aaKnown RBP8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tmem150aQ91WN2 271 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pcdhb4Q91XZ6 784 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 NgrnQ99KS2 293 aaKnown RBP8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Trappc5Q9CQA1 188 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Senp8Q9D2Z4 221 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pus10Q9D3U0 527 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ccdc182Q9D9C6 152 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mfap5Q9QZJ6 164 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mzf1S4R1L6 814 aa8.58□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zbed5B2RPU8 756 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm10800D3Z496 220 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zbtb10E9Q8X5 861 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rgs4O08899 205 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mkln1O89050 735 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ly6aP05533 134 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Oprl1P35377 367 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Klf1P46099 358 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm4981Q3ULJ8 291 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rabl6Q5U3K5 725 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hsd3b5Q61694 373 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Utp14bQ6EJB6 756 aaKnown RBP8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Defb22Q8BVC1 179 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Dclre1bQ8C7W7 541 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 SntnQ8C9X1 147 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 RhdQ8CF94 418 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Dnm1lQ8K1M6 742 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Capn8Q91VA3 703 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr459Q924H8 314 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Setd6Q9CWY3 473 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Q9DA42 136 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hao2Q9NYQ2 353 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Entpd5Q9WUZ9 427 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Igkv6-29A0A0G2JEI6 115 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 FanceB8JJD6 213 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fam170bE9PXT9 378 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm3526E9PZM0 191 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zfp277E9Q6D6 583 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms