RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Kir3dl2Q673W2 388 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Shkbp1Q6P7W2 704 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Tas2r106Q7M724 308 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr1252Q7TQZ2 314 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Smoc1Q8BLY1 463 aaKnown RBP16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Lrch3Q8BVU0 778 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Samd3Q8C4H2 520 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Slc35c2Q8VCX2 364 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Lgals12Q91VD1 314 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Ovca2Q9D7E3 225 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 ArntlQ9WTL8 632 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Gm8334F7CD45 553 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 ClppO88696 272 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Oas1aP11928 367 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Folr1P35846 255 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Zmat1Q3V0C1 714 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr325Q5NCD2 326 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Khdrbs1Q60749 443 aaKnown RBP16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Kmt5cQ6Q783 468 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Tmem169Q8BG50 297 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Hs3st5Q8BSL4 346 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Slc49a3Q8CE47 516 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Syn3Q8JZP2 579 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Oas1gQ8K469 367 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 KmoQ91WN4 479 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Mrpl45Q9D0Q7 306 aaKnown RBP16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Gid8Q9D7M1 228 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Bcl10Q9Z0H7 233 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Lipo4D3Z608 396 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Klf10O89091 479 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 P01644 108 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 P01645 108 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 P01646 108 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 P01647 108 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Cbx3P23198 183 aaKnown RBP16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Ppp3ccP48455 513 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Mdga1Q0PMG2 940 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfml2bQ3V1G4 746 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Mfsd14bQ8CIA9 507 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 SarafQ8R3Q0 334 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Mcoln3Q8R4F0 553 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Cd209eQ91ZW7 208 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Il1rl2Q9ERS7 574 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Nrg4Q9WTX4 115 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Vmn2r38G3UYA8 861 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Pabpc4lG5E8X2 370 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Vmn2r33K7N705 861 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Mapkapk2P49138 386 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Nfatc3P97305 1075 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 PrlrQ08501 608 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Krt2Q3TTY5 707 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 SbplQ3TUY3 232 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 SyncripQ7TMK9 623 aaKnown RBP16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr813Q7TRH5 310 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Zfp438Q8BFX2 798 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Q8BP99 230 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Agr3Q8R3W7 165 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr273Q8VG87 317 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Lrrc17Q9CXD9 443 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 PacrglQ9D3X5 248 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Hm13Q9D8V0 378 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 CtsrQ9JIA9 334 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Thap11Q9JJD0 305 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Padi4Q9Z183 666 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 Col5a3Q9JLI2 1739 aa16.22■□□□□ 0.19
Shh-201ENSMUST00000002708 BC049352E9Q2Z6 85 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Gna12P27600 379 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Slc26a1P58735 704 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Tuba1cP68373 449 aaKnown RBP16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Mex3cQ05A36 652 aaKnown RBP16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 March5Q3KNM2 278 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Plk5Q4FZD7 595 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Fam189bQ5HZJ5 669 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Sdf4Q61112 361 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Gpr19Q61121 415 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Cfap206Q6PE87 622 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Pex26Q8BGI5 305 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Hid1Q8R1F6 788 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 AcmsdQ8R519 336 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Tm4sf4Q91XD3 202 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Alg14Q9D081 217 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 ArskQ9D2L1 553 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Snrnp48Q9D361 337 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Tuba8Q9JJZ2 449 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Cyp4a29A0A087WPC3 509 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Smok4aA0JLX3 433 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Skint7A7XV04 395 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Phf11cB4XVP9 339 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 P01664 111 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 P04213 122 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Tnfsf4P43488 198 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Psme2P97372 239 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Rbbp7Q60973 425 aaKnown RBP16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 A4galtQ67BJ4 359 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr834Q7TRG8 312 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Arhgef38Q80VK6 770 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Teddm1aQ810U2 305 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Cdh7Q8BM92 785 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Zmym6Q8BS54 1249 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Ptbp2Q91Z31 531 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms