RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CLCN7P51798 805 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 ATP6AP1Q15904 470 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 PABPC1LQ4VXU2 614 aaKnown RBP16.61■□□□□ 0.25
PHGDH-223ENST00000641597 SGO1Q5FBB7 561 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 RNF180Q86T96 592 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 OR4F6Q8NGB9 312 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 DDI1Q8WTU0 396 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 RSL24D1Q9UHA3 163 aaKnown RBP16.61■□□□□ 0.25
PHGDH-223ENST00000641597 POLR3HQ9Y535 204 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-223ENST00000641597 KRT87PA6NCN2 255 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 SYCE1LA8MT33 242 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 EEDO75530 441 aaKnown RBP16.6■□□□□ 0.25
PHGDH-223ENST00000641597 PYGLP06737 847 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 TCF3P15923 654 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 UGT1A1P22309 533 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 UGT1A4P22310 534 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 UGT1A3P35503 534 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 UGT1A5P35504 534 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 ZXDBP98169 803 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 BTG3Q14201 252 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-223ENST00000641597 C5orf22Q49AR2 442 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 ARHGAP22Q7Z5H3 698 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 NKAPQ8N5F7 415 aaKnown RBP16.6■□□□□ 0.25
PHGDH-223ENST00000641597 OR56A4Q8NGH8 313 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 B4GALNT2Q8NHY0 566 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 TTPALQ9BTX7 342 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 APOL5Q9BWW9 433 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 VN1R3Q9BXE9 311 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.6■□□□□ 0.255e-8■■□□□ 14.4
PHGDH-223ENST00000641597 CARS2Q9HA77 564 aaKnown RBP16.6■□□□□ 0.25
PHGDH-223ENST00000641597 ELOVL2Q9NXB9 296 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 RPLP2P05387 115 aaKnown RBP16.6■□□□□ 0.25
PHGDH-223ENST00000641597 HOXB8P17481 243 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-223ENST00000641597 CST5P28325 142 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-223ENST00000641597 RFC2P35250 354 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 CLCN2P51788 898 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 ERVK-8P63133 956 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 BNIP2Q12982 314 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 PLD1Q13393 1074 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 SBSNQ6UWP8 590 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 LRRC8DQ7L1W4 858 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 GOLGA7Q7Z5G4 137 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 DTWD1Q8N5C7 304 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 CIPCQ9C0C6 399 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 IKZF5Q9H5V7 419 aa16.6■□□□□ 0.25
PHGDH-223ENST00000641597 A0A1W2PQ45 241 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 A0A1W2PQY0 241 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 STX16O14662 325 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 GIPC1O14908 333 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 SMAD6O43541 496 aaKnown RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 B3GALT4O96024 378 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 HMGA1P17096 107 aaKnown RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 TTPAP49638 278 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 HMGCS1Q01581 520 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 NR6A1Q15406 480 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 PHKG1Q16816 387 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 SLC36A3Q495N2 470 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 ATP6AP1LQ52LC2 224 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 PRMT9Q6P2P2 845 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 DLEU7Q6UYE1 221 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 TMCO2Q7Z6W1 182 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 CLVS1Q8IUQ0 354 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 CLHC1Q8NHS4 586 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 SGCDQ92629 289 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 EZH1Q92800 747 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.59■□□□□ 0.252e-7■■■■■ 60.5
PHGDH-223ENST00000641597 SCLYQ96I15 445 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 C17orf80Q9BSJ5 609 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 CHID1Q9BWS9 393 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 TRIM54Q9BYV2 358 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 BRINP2Q9C0B6 783 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 NAA50Q9GZZ1 169 aaKnown RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 NEUROG3Q9Y4Z2 214 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 CLDN11O75508 207 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 CHEK2O96017 543 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 CYBRD1Q53TN4 286 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 HECTD3Q5T447 861 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 INTS11Q5TA45 600 aaKnown RBP16.59■□□□□ 0.25
PHGDH-223ENST00000641597 SPATA19Q7Z5L4 167 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 HS3ST5Q8IZT8 346 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 OR10Q1Q8NGQ4 319 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 HAUS8Q9BT25 410 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 ZFP14Q9HCL3 533 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 SUN2Q9UH99 717 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 FADS3Q9Y5Q0 445 aa16.59■□□□□ 0.25
PHGDH-223ENST00000641597 H0Y626 953 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 CLGNO14967 610 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 CLOCKO15516 846 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 DFNA5O60443 496 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 TRIM16O95361 564 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 MLYCDO95822 493 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 LAPTM5Q13571 262 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 AP5B1Q2VPB7 878 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 FRA10AC1Q70Z53 315 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 NAT16Q8N8M0 369 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 MFSD2AQ8NA29 543 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 MTFMTQ96DP5 389 aaKnown RBP16.58■□□□□ 0.25
PHGDH-223ENST00000641597 GPR63Q9BZJ6 419 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 IPPKQ9H8X2 491 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms