RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 IDEP14735 1019 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 AGXTP21549 392 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 CCND1P24385 295 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 IGFBP5P24593 272 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 NUP107P57740 925 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SUMO1P63165 101 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 RBP5P82980 135 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SRSF2Q01130 221 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 GPS2Q13227 327 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TUBB3Q13509 450 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 CTTNQ14247 550 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 LRRC14Q15048 493 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC142Q17RM4 750 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 ELOA3BQ3SY89 546 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 ATXN7L2Q5T6C5 722 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 GALNT17Q6IS24 598 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 PLEKHM3Q6ZWE6 761 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 LGI4Q8N135 537 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 FANCBQ8NB91 859 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 ELOA3Q8NG57 546 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 OR2Y1Q8NGV0 311 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 NCOA7Q8NI08 942 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 GTF3AQ92664 365 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SPATA13Q96N96 652 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 BHMT2Q9H2M3 363 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 KCTD5Q9NXV2 234 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 POLR3KQ9Y2Y1 108 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 IGLON5A6NGN9 336 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 OR5K4A6NMS3 321 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 KPNA3O00505 521 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 MATN3O15232 486 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 OR10H2O60403 315 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 THBS1P07996 1170 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 BMP4P12644 408 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TEAD1P28347 426 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 OTX2P32243 289 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 PTGS2P35354 604 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 CCT5P48643 541 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 ATP5J2P56134 94 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 HILS1P60008 231 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TUBB4BP68371 445 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 IL13RA1P78552 427 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TUBB2AQ13885 445 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 GRM3Q14832 879 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 UNC5AQ6ZN44 842 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SLCO4C1Q6ZQN7 724 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 UNC45BQ8IWX7 931 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 RBM12BQ8IXT5 1001 aaKnown RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 ERP27Q96DN0 273 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 ZDHHC12Q96GR4 267 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TRIM51Q9BSJ1 452 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 AARSD1Q9BTE6 412 aaKnown RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TUBB2BQ9BVA1 445 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 ANGPTL4Q9BY76 406 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 PRKRIP1Q9H875 184 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TRIM39Q9HCM9 518 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 ATP13A1Q9HD20 1204 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SPATS2LQ9NUQ6 558 aaKnown RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 IL36AQ9UHA7 158 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SLCO3A1Q9UIG8 710 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 RASAL2Q9UJF2 1139 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 NOL7Q9UMY1 257 aaKnown RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 HS3ST2Q9Y278 367 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 CPAMD8Q8IZJ3 1885 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SLC5A10A0PJK1 596 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC69A6NI79 296 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 HSPB2A8KAH6 182 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 NEMP1O14524 444 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 PMM2O15305 246 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TBL1XO60907 577 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SCRG1O75711 98 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 KLF7O75840 302 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TBX18O95935 607 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC166P0CW27 439 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SETSIPP0DME0 302 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 PF4V1P10720 104 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 NAT2P11245 290 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 FLT3P36888 993 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 NPTX2P47972 431 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SLC11A2P49281 568 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 ZNF143P52747 638 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 DCDC1P59894 354 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SLC7A5Q01650 507 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 FOXO1Q12778 655 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 CDH18Q13634 790 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 LRP8Q14114 963 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 IRF4Q15306 451 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 HSPB2Q16082 182 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TMEM52BQ4KMG9 183 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 ZKSCAN2Q63HK3 967 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 CRELD2Q6UXH1 353 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 NEK10Q6ZWH5 1172 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SLC9B2Q86UD5 537 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 NRROSQ86YC3 692 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SFRP1Q8N474 314 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SIDT2Q8NBJ9 832 aaKnown RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 CATSPER1Q8NEC5 780 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 OR2W6PQ8NHA6 318 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 OR1E3Q8WZA6 343 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 NCSTNQ92542 709 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms