RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 C6orf163Q5TEZ5 329 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 KBTBD6Q86V97 674 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 TRIML2Q8N7C3 387 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 SPERTQ8NA61 448 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 ITFG1Q8TB96 612 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 SORCS1Q8WY21 1168 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 PRPF18Q99633 342 aaKnown RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 ILKAPQ9H0C8 392 aaPredicted RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 CDH19Q9H159 772 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 KCTD5Q9NXV2 234 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 CDH22Q9UJ99 828 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 PACSIN3Q9UKS6 424 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 SATB2Q9UPW6 733 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 APOBEC2Q9Y235 224 aaKnown RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 SZT2Q5T011 3432 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 TMEM233B4DJY2 109 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 TMX2-CTNND1H3BSU7 103 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 CLDN7O95471 211 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 TYRP14679 529 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 PORP16435 677 aaPredicted RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 AOC1P19801 751 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 NCF2P19878 526 aaPredicted RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 FDXRP22570 491 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 RXRGP48443 463 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 EPHA5P54756 1037 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 CREB5Q02930 508 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 TMC5Q6UXY8 1006 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 AMIGO2Q86SJ2 522 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 SNX32Q86XE0 403 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 ZSWIM9Q86XI8 627 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 IRF7Q92985 503 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 PTERQ96BW5 349 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 AARSD1Q9BTE6 412 aaKnown RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 APOL5Q9BWW9 433 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 WDR55Q9H6Y2 383 aaPredicted RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 ZNF696Q9H7X3 374 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 HECAQ9UBI9 543 aaPredicted RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 TSR3Q9UJK0 312 aaKnown RBP11.39□□□□□ -0.59
CLN6-217ENST00000636964 PKP3Q9Y446 797 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 REV3LO60673 3130 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 C1orf232A0A0U1RR37 186 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 IQCF5A8MTL0 148 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 ADAM23O75077 832 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 OGNP20774 298 aaKnown RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 ENTPD1P49961 510 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 AP1S1P61966 158 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 CTBSQ01459 385 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 FBXO48Q5FWF7 155 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 PAQR3Q6TCH7 311 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 FAM151BQ6UXP7 276 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 GALNT7Q86SF2 657 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 ISCA2Q86U28 154 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 LSMEM2Q8N112 164 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 LPGAT1Q92604 370 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 CNBD2Q96M20 576 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 MRPS26Q9BYN8 205 aaKnown RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 SARS2Q9NP81 518 aaKnown RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 RIMKLBQ9ULI2 386 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 ARPC4-TTLL3A0A0A6YYG9 625 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 TMEM114B3SHH9 223 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 H3BMM5 538 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 PEX1O43933 1283 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 KLHL41O60662 606 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 XYLBO75191 536 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 SEC24DO94855 1032 aaPredicted RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 CA5AP35218 305 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 HNF1BP35680 557 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 RPL26P61254 145 aaKnown RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 RALGDSQ12967 914 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 TYSND1Q2T9J0 566 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 C6orf52Q5T4I8 152 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 TSPAN33Q86UF1 283 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 TICAM1Q8IUC6 712 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 ICA1LQ8NDH6 482 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 OR2AP1Q8NGE2 309 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 LMLNQ96KR4 655 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 LRRC3BQ96PB8 259 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 SLC30A3Q99726 388 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 NUF2Q9BZD4 464 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 IL17CQ9P0M4 197 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 MRPS23Q9Y3D9 190 aaKnown RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 DTNAQ9Y4J8 743 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 A8MT66 165 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 NIPSNAP2O75323 286 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 IGSF6O95976 241 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 JUNP05412 331 aaKnown RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 ATP5F1P24539 256 aaPredicted RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 PBX2P40425 430 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 GPM6BQ13491 265 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 ACAP2Q15057 778 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 ALDH16A1Q8IZ83 802 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 ADGRG2Q8IZP9 1017 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 GFM2Q969S9 779 aaKnown RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 GPR21Q99679 349 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 MTIF3Q9H2K0 278 aaKnown RBP11.38□□□□□ -0.59
CLN6-217ENST00000636964 ZDHHC6Q9H6R6 413 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 SPHK2Q9NRA0 654 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 NCKIPSDQ9NZQ3 722 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms