RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 EXO1Q9UQ84 846 aaKnown RBP3.08□□□□□ -1.92
SRP54-214ENST00000630962 IGKV3D-15A0A087WSY6 115 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 HHLA1C9JL84 531 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 LIPFP07098 398 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 H1F0P07305 194 aaKnown RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 ERVK-10P10266 1014 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 ATP1A3P13637 1013 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 ANXA7P20073 488 aaKnown RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 ITGA3P26006 1051 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 PPARGP37231 505 aaPredicted RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 RPS18P62269 152 aaKnown RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 CEBPZQ03701 1054 aaKnown RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 ZC2HC1CQ53FD0 456 aaPredicted RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 LRIF1Q5T3J3 769 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 ALS2CLQ60I27 953 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 KLHL35Q6PF15 583 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 RBMS3Q6XE24 437 aaKnown RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 PTOV1Q86YD1 416 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 SCFD2Q8WU76 684 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 HDAC2Q92769 488 aaKnown RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 FSD1Q9BTV5 496 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 ZDHHC18Q9NUE0 388 aa3.07□□□□□ -1.92
SRP54-214ENST00000630962 ORC3Q9UBD5 711 aaPredicted RBP3.07□□□□□ -1.92
SRP54-214ENST00000630962 MED19A0JLT2 244 aaPredicted RBP3.06□□□□□ -1.92
SRP54-214ENST00000630962 OR2M5A3KFT3 312 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 TMEM8BA6NDV4 472 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 CDRT15L2A8MXV6 281 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 A8MZ25 164 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 NDUFS4O43181 175 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 EPB41L2O43491 1005 aaKnown RBP3.06□□□□□ -1.92
SRP54-214ENST00000630962 CIDEAO60543 219 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 ZNF217O75362 1048 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 CSPG5O95196 566 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 EML2O95834 649 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 KRT19P08727 400 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 ACADMP11310 421 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 LIFP15018 202 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 MSH3P20585 1137 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 HRH2P25021 359 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 ALDH4A1P30038 563 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 RGS2P41220 211 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 MPP1Q00013 466 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 MBTD1Q05BQ5 628 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 MFAP5Q13361 173 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 TAF13Q15543 124 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 KIAA1644Q3SXP7 199 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 RAD9BQ6WBX8 426 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 ZNF534Q76KX8 674 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 PXKQ7Z7A4 578 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 RBM15BQ8NDT2 890 aaKnown RBP3.06□□□□□ -1.92
SRP54-214ENST00000630962 TRIM58Q8NG06 486 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 ARHGEF40Q8TER5 1519 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 OR2A14Q96R47 310 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 FLRT3Q9NZU0 649 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 KLHL9Q9P2J3 617 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 AMACRQ9UHK6 382 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 CMAHPQ9Y471 501 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 LAS1LQ9Y4W2 734 aaKnown RBP3.06□□□□□ -1.92
SRP54-214ENST00000630962 PRSS21Q9Y6M0 314 aa3.06□□□□□ -1.92
SRP54-214ENST00000630962 PRR32B1ATL7 298 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 J3QR06 171 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 SH2B2O14492 632 aaPredicted RBP3.05□□□□□ -1.92
SRP54-214ENST00000630962 EDN1P05305 212 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 PATE4P0C8F1 98 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 FAM157CP0CG43 387 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 NR1D1P20393 614 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 CBLP22681 906 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 CAMPP49913 170 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 SETQ01105 290 aaPredicted RBP3.05□□□□□ -1.92
SRP54-214ENST00000630962 IKQ13123 557 aaPredicted RBP3.05□□□□□ -1.92
SRP54-214ENST00000630962 DDX10Q13206 875 aaKnown RBP3.05□□□□□ -1.92
SRP54-214ENST00000630962 MED22Q15528 200 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 GKAP1Q5VSY0 366 aaPredicted RBP3.05□□□□□ -1.92
SRP54-214ENST00000630962 KLC3Q6P597 504 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 TRIM65Q6PJ69 517 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 ATG9AQ7Z3C6 839 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 L3MBTL4Q8NA19 623 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 UCMAQ8WVF2 138 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 PERPQ96FX8 193 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 CMTM3Q96MX0 182 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 WDFY2Q96P53 400 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 SMC6Q96SB8 1091 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 SLX1AQ9BQ83 275 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 TRIM51Q9BSJ1 452 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 ZHX3Q9H4I2 956 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 SLC52A3Q9NQ40 469 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 OLFML3Q9NRN5 406 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 INTS10Q9NVR2 710 aaKnown RBP3.05□□□□□ -1.92
SRP54-214ENST00000630962 AASSQ9UDR5 926 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 SLC7A7Q9UM01 511 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 KCNK7Q9Y2U2 307 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 MMP24Q9Y5R2 645 aa3.05□□□□□ -1.92
SRP54-214ENST00000630962 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.05□□□□□ -1.92
SRP54-214ENST00000630962 SNED1Q8TER0 1413 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 ITIH6Q6UXX5 1313 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 CCDC189A1A4V9 331 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 ANTXRLA6NF34 631 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 H3BQ06 376 aaPredicted RBP3.04□□□□□ -1.92
SRP54-214ENST00000630962 TCERG1O14776 1098 aaKnown RBP3.04□□□□□ -1.92
SRP54-214ENST00000630962 ARHGEF9O43307 516 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms