RNA–Protein interactions for RNA: ENST00000623052.1

C9orf170-201, Transcript of chromosome 9 open reading frame 170, humanhuman

TSL 1 (best) BASIC

Gene C9orf170, Length 3,239 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf170-201ENST00000623052 MTPNP58546 118 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 IL2P60568 153 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 ADARB1P78563 741 aaKnown RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 PMS2P3Q13401 168 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 KIAA0040Q15053 153 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 ACBD5Q5T8D3 534 aaPredicted RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 GOLGA7Q7Z5G4 137 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 GPR180Q86V85 440 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 SEPHS2Q99611 448 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 MUC13Q9H3R2 512 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 SARS2Q9NP81 518 aaKnown RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 ELOVL2Q9NXB9 296 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 LHX3Q9UBR4 397 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 DNMT3LQ9UJW3 386 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 CCL27Q9Y4X3 112 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 MAGED1Q9Y5V3 778 aaPredicted RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 A0A0J9YVX5 310 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 SYNCRIPO60506 623 aaKnown RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 TSPAN3O60637 253 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 PYGLP06737 847 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 CAPN1P07384 714 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 ENO2P09104 434 aaPredicted RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 CNPP09543 421 aaKnown RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 POLR2IP36954 125 aaKnown RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 STT3AP46977 705 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 DGKQP52824 942 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 LYSMD3Q7Z3D4 306 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 DPP10Q8N608 796 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 TMEM161AQ9NX61 479 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 SMPD3Q9NY59 655 aaPredicted RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
C9orf170-201ENST00000623052 FADS3Q9Y5Q0 445 aa13.18□□□□□ -0.3
C9orf170-201ENST00000623052 H7C0S8 307 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 STC2O76061 302 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 RHOCP08134 193 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 CAPGP40121 348 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 RPS9P46781 194 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 TTPAP49638 278 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 CLCN4P51793 760 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 TRAF3Q13114 568 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 ABRAXAS2Q15018 415 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 CHST15Q7LFX5 561 aaPredicted RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 OR4F6Q8NGB9 312 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 FAM81AQ8TBF8 368 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 C12orf43Q96C57 262 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 PPM1MQ96MI6 270 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 A0A087WXM4 84 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 ILVBLA1L0T0 632 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 SCAMP3O14828 347 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 RPL17P18621 184 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 CORO1AP31146 461 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 ATP5C1P36542 298 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 NKG7Q16617 165 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 ZBED5Q49AG3 693 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 RFTN2Q52LD8 501 aaPredicted RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 NCEH1Q6PIU2 408 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 CLVS1Q8IUQ0 354 aaPredicted RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 TNIP2Q8NFZ5 429 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 NAA50Q9GZZ1 169 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 THEGQ9P2T0 379 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 PTBP2Q9UKA9 531 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 ZNF840PA6NDX5 716 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 TAPBPO15533 448 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 FZD6O60353 706 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 NBNO60934 754 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 ATE1O95260 518 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 C7P10643 843 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 KPNA1P52294 538 aaPredicted RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 ADARP55265 1226 aaKnown RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 ATP6AP1LQ52LC2 224 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 RNF219Q5W0B1 726 aaPredicted RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 CYP20A1Q6UW02 462 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 HID1Q8IV36 788 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 BBS5Q8N3I7 341 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 CHID1Q9BWS9 393 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 BOCQ9BWV1 1114 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 IKZF5Q9H5V7 419 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 COMMD8Q9NX08 183 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 UTS2RQ9UKP6 389 aa13.17□□□□□ -0.3
C9orf170-201ENST00000623052 POLR3HQ9Y535 204 aaPredicted RBP13.17□□□□□ -0.3
C9orf170-201ENST00000623052 CLOCKO15516 846 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 B4GAT1O43505 415 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 CLDN11O75508 207 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 PCBP2Q15366 365 aaKnown RBP eCLIP13.16□□□□□ -0.3
C9orf170-201ENST00000623052 LRRC23Q53EV4 343 aaPredicted RBP13.16□□□□□ -0.3
C9orf170-201ENST00000623052 TMEM214Q6NUQ4 689 aaKnown RBP13.16□□□□□ -0.3
C9orf170-201ENST00000623052 ELMSAN1Q6PJG2 1045 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 IL27RAQ6UWB1 636 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 GPR141Q7Z602 305 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 ITIH5Q86UX2 942 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 TBC1D21Q8IYX1 336 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 PDPRQ8NCN5 879 aa13.16□□□□□ -0.3
C9orf170-201ENST00000623052 VPS50Q96JG6 964 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms