RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 ISCA2Q86U28 154 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 HEATR4Q86WZ0 1026 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 UBALD2Q8IYN6 164 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 GJD3Q8N144 294 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 TPSD1Q9BZJ3 242 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 OR2AG1Q9H205 316 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 PREBQ9HCU5 417 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 ITM2CQ9NQX7 267 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 FAM8A1Q9UBU6 413 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 CYP8B1Q9UNU6 501 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 TMEM98Q9Y2Y6 226 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 OR1A2Q9Y585 309 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 NPEPPSL1A6NEC2 478 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 CDC7O00311 574 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 SLC31A1O15431 190 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 DCNP07585 359 aaKnown RBP18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 OR56A5P0C7T3 313 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 SGCGQ13326 291 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 INPP5AQ14642 412 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 CHI3L2Q15782 390 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 TRPM8Q7Z2W7 1104 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 PIWIL4Q7Z3Z4 852 aaKnown RBP18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 ADGRG6Q86SQ4 1221 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 TSTD1Q8NFU3 115 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 PJA1Q8NG27 643 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 LRRC8CQ8TDW0 803 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 EXT2Q93063 718 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 MRPL46Q9H2W6 279 aaKnown RBP18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 ZNF395Q9H8N7 513 aaPredicted RBP18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 SYTL2Q9HCH5 934 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 SIRPGQ9P1W8 387 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 USP36Q9P275 1121 aaKnown RBP18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 ARL2BPQ9Y2Y0 163 aa18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 PCYT1BQ9Y5K3 369 aaPredicted RBP18.33■□□□□ 0.52
SEMA6C-210ENST00000621728 TMEM202A6NGA9 273 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 CFAP99D6REC4 459 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 FGF3P11487 239 aaPredicted RBP18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 SLC26A3P40879 764 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 SCTRP47872 440 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 AGERQ15109 404 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 DOK6Q6PKX4 331 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 LCA5Q86VQ0 697 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 NLRP8Q86W28 1048 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 ZBTB2Q8N680 514 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 INPP5DQ92835 1189 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 MANSC1Q9H8J5 431 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 FGFR1OP2Q9NVK5 253 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 ATXN10Q9UBB4 475 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 CA5BQ9Y2D0 317 aa18.32■□□□□ 0.52
SEMA6C-210ENST00000621728 DLX3O60479 287 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 RALBP11234 206 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 IGFALSP35858 605 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 SKIV2L2P42285 1042 aaKnown RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 IL2P60568 153 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 ACAP2Q15057 778 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 TSNQ15631 228 aaKnown RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 UGT3A1Q6NUS8 523 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 TMEM220Q6QAJ8 160 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 ADAMTSL4Q6UY14 1074 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 OTOAQ7RTW8 1153 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 NKAPQ8N5F7 415 aaKnown RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 FAM160A2Q8N612 972 aaPredicted RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 RLN3Q8WXF3 142 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 COX14Q96I36 57 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 HIC2Q96JB3 615 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 MRPL57Q9BQC6 102 aaKnown RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 DERL2Q9GZP9 239 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 BTBD1Q9H0C5 482 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 SPATS2LQ9NUQ6 558 aaKnown RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 ANKRD12Q6UB98 2062 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 BTN3A1O00481 513 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 CDK14O94921 469 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 PDGFBP01127 241 aaPredicted RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 MYL2P10916 166 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 PBLDP30039 288 aaPredicted RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 CDK3Q00526 305 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 BOP1Q14137 746 aaKnown RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 KLC3Q6P597 504 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 ZYG11AQ6WRX3 759 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 SPATA21Q7Z572 469 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 CCDC91Q7Z6B0 441 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 LILRA3Q8N6C8 439 aaPredicted RBP18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 NELL2Q99435 816 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 SLC12A4Q9UP95 1085 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 PRKAB1Q9Y478 270 aa18.31■□□□□ 0.52
SEMA6C-210ENST00000621728 BIRC5O15392 142 aa18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 ATG13O75143 517 aa18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 ZNF8P17098 575 aaPredicted RBP18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 AOAHP28039 575 aa18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 ATG14Q6ZNE5 492 aa18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 VRK3Q8IV63 474 aa18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 PANX3Q96QZ0 392 aa18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 C6orf106Q9H6K1 298 aaPredicted RBP18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 CYP4F12Q9HCS2 524 aa18.3■□□□□ 0.52
SEMA6C-210ENST00000621728 CFAP73A6NFT4 308 aa18.29■□□□□ 0.52
SEMA6C-210ENST00000621728 RASSF9O75901 435 aa18.29■□□□□ 0.52
SEMA6C-210ENST00000621728 SEMA4FO95754 770 aa18.29■□□□□ 0.52
SEMA6C-210ENST00000621728 APOA4P06727 396 aa18.29■□□□□ 0.52
SEMA6C-210ENST00000621728 KPNA2P52292 529 aaKnown RBP18.29■□□□□ 0.52
SEMA6C-210ENST00000621728 CLDN2P57739 230 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms