RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 HTR1EP28566 365 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 CCND3P30281 292 aaPredicted RBP11.65□□□□□ -0.54
C11orf54-215ENST00000617482 TTPAP49638 278 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 SGSHP51688 502 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 NUP107P57740 925 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 MBTPS1Q14703 1052 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 RAB39AQ14964 217 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 NEDD8Q15843 81 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 SPATS1Q496A3 300 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 KLHL35Q6PF15 583 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 KCTD8Q6ZWB6 473 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 EFL1Q7Z2Z2 1120 aaKnown RBP11.65□□□□□ -0.54
C11orf54-215ENST00000617482 LYSMD3Q7Z3D4 306 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 ZFAND4Q86XD8 727 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 LRRC43Q8N309 656 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 PAPD5Q8NDF8 572 aaKnown RBP11.65□□□□□ -0.54
C11orf54-215ENST00000617482 ADAMTS16Q8TE57 1224 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 MUC13Q9H3R2 512 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 IRAK4Q9NWZ3 460 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 ZIM2Q9NZV7 527 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 COMMD10Q9Y6G5 202 aa11.65□□□□□ -0.54
C11orf54-215ENST00000617482 MANSC4A6NHS7 340 aaPredicted RBP11.65□□□□□ -0.55
C11orf54-215ENST00000617482 H3BNC9 293 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 TMEM189-UBE2V1I3L0A0 370 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 SYN3O14994 580 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 KDELR3O43731 214 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 GJB5O95377 273 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 ENO2P09104 434 aaPredicted RBP11.65□□□□□ -0.55
C11orf54-215ENST00000617482 CKBP12277 381 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 CR2P20023 1033 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 FLT3LGP49771 235 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 MAPK10P53779 464 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 MYBPC3Q14896 1274 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 DLEU7Q6UYE1 221 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 TMEM26Q6ZUK4 368 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 PROSER1Q86XN7 944 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 DTWD1Q8N5C7 304 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 NSMCE2Q96MF7 247 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 MUS81Q96NY9 551 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 BDH2Q9BUT1 245 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 OSBPL6Q9BZF3 934 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 NAA50Q9GZZ1 169 aaKnown RBP11.65□□□□□ -0.55
C11orf54-215ENST00000617482 HIPK3Q9H422 1215 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 PFDN4Q9NQP4 134 aa11.65□□□□□ -0.55
C11orf54-215ENST00000617482 TRIM64A6NGJ6 449 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 H3BMQ9 156 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 RSL1D1O76021 490 aaKnown RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 C7P10643 843 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ITGB6P18564 788 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 EEF1B2P24534 225 aaKnown RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ELK4P28324 431 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ATP5C1P36542 298 aaKnown RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 GATMP50440 423 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 MRPL58Q14197 206 aaKnown RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 C16orf72Q14CZ0 275 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 NR6A1Q15406 480 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 RFTN2Q52LD8 501 aaPredicted RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 FAM126BQ8IXS8 530 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 OSCP1Q8WVF1 389 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ISG20Q96AZ6 181 aaKnown RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 COG8Q96MW5 612 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ZNF382Q96SR6 550 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 NTN4Q9HB63 628 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 GKN1Q9NS71 199 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 PKD2L2Q9NZM6 624 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ARIH1Q9Y4X5 557 aaPredicted RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 A0A1W2PPW3 197 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 H0Y858 1186 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 SCAMP3O14828 347 aaKnown RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 GUCA1CO95843 209 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ALBP02768 609 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 RHOCP08134 193 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 TCF3P15923 654 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 NFKBIAP25963 317 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 PIK3CGP48736 1102 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 SLC11A2P49281 568 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 CDH4P55283 916 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ABRAXAS2Q15018 415 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 AP5B1Q2VPB7 878 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 FGD3Q5JSP0 725 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 FAM26DQ5JW98 314 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 CYP20A1Q6UW02 462 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 FRA10AC1Q70Z53 315 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ITIH5Q86UX2 942 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 OR4F6Q8NGB9 312 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 KCNJ9Q92806 393 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ZIC5Q96T25 663 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 ACTL8Q9H568 366 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 TLR9Q9NR96 1032 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 DNMT3LQ9UJW3 386 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 VPS9D1Q9Y2B5 631 aa11.64□□□□□ -0.55
C11orf54-215ENST00000617482 POLR3HQ9Y535 204 aaPredicted RBP11.64□□□□□ -0.55
C11orf54-215ENST00000617482 OR6C75A6NL08 312 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 PFDN6O15212 129 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 PRAMEF12O95522 483 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 F11P03951 625 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 KLKB1P03952 638 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms