RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 SLAIN1Q8ND83 568 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PTERQ96BW5 349 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 TMEM175Q9BSA9 504 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 RETREG1Q9H6L5 497 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 TLL2Q9Y6L7 1015 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CACNG3O60359 315 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 HOXC8P31273 242 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 GDF5P43026 501 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ATP4BP51164 291 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 HIST2H2ACQ16777 129 aaPredicted RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 HIST2H2AA3Q6FI13 130 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 OGFOD2Q6N063 350 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ZNF621Q6ZSS3 439 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SNX20Q7Z614 316 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SATL1Q86VE3 508 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 HID1Q8IV36 788 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ADHFE1Q8IWW8 467 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ATG16L2Q8NAA4 619 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 NAT14Q8WUY8 206 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SLC45A3Q96JT2 553 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 MAELQ96JY0 434 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 ATOH8Q96SQ7 321 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ZIC5Q96T25 663 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PTTG2Q9NZH5 202 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 MTRRQ9UBK8 725 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PNMA8BQ9ULN7 279 aaPredicted RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 OAZ3Q9UMX2 235 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 FKTNO75072 461 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 FGF4P08620 206 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 PPM1FP49593 454 aaPredicted RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 NADK2Q4G0N4 442 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 INTS11Q5TA45 600 aaKnown RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 HACD2Q6Y1H2 254 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 C8orf59Q8N0T1 100 aaPredicted RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 GLB1L3Q8NCI6 653 aaPredicted RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 ASZ1Q8WWH4 475 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 C1orf109Q9NX04 203 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SCN3BQ9NY72 215 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 ZIM2Q9NZV7 527 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 PTGDR2Q9Y5Y4 395 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 BACE2Q9Y5Z0 518 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 ECM29Q5VYK3 1845 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 TRAV19A0A0A6YYK7 116 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 PDLIM1O00151 329 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 HS6ST1O60243 411 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 PENKP01210 267 aaPredicted RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 UMPSP11172 480 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 CSKP41240 450 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 DGKQP52824 942 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 MTPNP58546 118 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 FOXM1Q08050 763 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 BHLHA9Q7RTU4 235 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 TAGAPQ8N103 731 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 MARVELD2Q8N4S9 558 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 MRPS26Q9BYN8 205 aaKnown RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 HPS4Q9NQG7 708 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 DNAJC11Q9NVH1 559 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SH3BP4Q9P0V3 963 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 RSL24D1Q9UHA3 163 aaKnown RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 MUSKO15146 869 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 LZTS3O60299 673 aaPredicted RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 ENO2P09104 434 aaPredicted RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 SBK3P0C264 359 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 ITPKAP23677 461 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SEMG2Q02383 582 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SZRD1Q7Z422 152 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 TMEM132CQ8N3T6 1108 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 NCSTNQ92542 709 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 FUBP1Q96AE4 644 aaKnown RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 L3HYPDHQ96EM0 354 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SPATA17Q96L03 361 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 TMEM74Q96NL1 305 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SMIM14Q96QK8 99 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 PANX1Q96RD7 426 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 ZNF382Q96SR6 550 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 BRD9Q9H8M2 597 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 DMTF1Q9Y222 760 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SMCHD1A6NHR9 2005 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 IQCF5A8MTL0 148 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 KPNA5O15131 536 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 OR6B1O95007 311 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SCELO95171 688 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 G6PDP11413 515 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 COX7A2P14406 83 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 HTR6P50406 440 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 UFM1P61960 85 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 PRKCQQ04759 706 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 GTF2H2Q13888 395 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 C16orf72Q14CZ0 275 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 SLC8B1Q6J4K2 584 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 GTF2H2CQ6P1K8 395 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 BLOC1S3Q6QNY0 202 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 UBE2R2Q712K3 238 aaPredicted RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 HORMAD1Q86X24 394 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 OR52B6Q8NGF0 335 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 PXYLP1Q8TE99 480 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 LZICQ8WZA0 190 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 TRIM8Q9BZR9 551 aa6.29□□□□□ -1.4
SNX13-213ENST00000611725 ZCCHC2Q9C0B9 1178 aaKnown RBP6.29□□□□□ -1.4
SNX13-213ENST00000611725 MTIF3Q9H2K0 278 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms