RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 AKR1B15C9JRZ8 316 aaPredicted RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 AP3B1O00203 1094 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 PSMD9O00233 223 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 CACNB4O00305 520 aaPredicted RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MCF2LO15068 1137 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 SEC14L5O43304 696 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 PRAMEF2O60811 474 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 GPANK1O95872 356 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 SERPINC1P01008 464 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 PDHBP11177 359 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ETS1P14921 441 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ITGAXP20702 1163 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 SFPQP23246 707 aaKnown RBP eCLIP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 GATA3P23771 443 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 TYK2P29597 1187 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 HSPA4P34932 840 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MAGEA4P43358 317 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 PRMT2P55345 433 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ST8SIA6P61647 398 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 RPS8P62241 208 aaKnown RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 RAE1P78406 368 aaKnown RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 HSD11B2P80365 405 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ZBTB16Q05516 673 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 FPGSQ05932 587 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 CRHR2Q13324 411 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 GAB1Q13480 694 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 SHBQ15464 509 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 NAB2Q15742 525 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 CYP1B1Q16678 543 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 HIST2H2ACQ16777 129 aaPredicted RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 TWISTNBQ3B726 338 aaPredicted RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 EDRF1Q3B7T1 1238 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 USP39Q53GS9 565 aaKnown RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 HSP90AA5PQ58FG0 334 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 KCNT1Q5JUK3 1230 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 RARS2Q5T160 578 aaKnown RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 LRIF1Q5T3J3 769 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 FAM91A1Q658Y4 838 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MOXD1Q6UVY6 613 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MFSD7Q6UXD7 560 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 DPY19L3Q6ZPD9 716 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 C1orf186Q6ZWK4 172 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MARK2Q7KZI7 788 aaKnown RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 LPCAT2Q7L5N7 544 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MIER3Q7Z3K6 550 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 TSPAN33Q86UF1 283 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 TDRPQ86YL5 185 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MCEMP1Q8IX19 187 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ELMOD2Q8IZ81 293 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 SCYL3Q8IZE3 742 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ZNF808Q8N4W9 903 aaPredicted RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 DEFB123Q8N688 67 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 PNPLA1Q8N8W4 532 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MIGA1Q8NAN2 632 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 UXS1Q8NBZ7 420 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 LPCAT1Q8NF37 534 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 PSMA8Q8TAA3 256 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 TBC1D16Q8TBP0 767 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 KIAA1524Q8TCG1 905 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 URGCPQ8TCY9 931 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 SNX19Q92543 992 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 TMEM68Q96MH6 324 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 C1QTNF5Q9BXJ0 243 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 CADM1Q9BY67 442 aaKnown RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 TKTL2Q9H0I9 626 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MMP27Q9H306 513 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 MMRN2Q9H8L6 949 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ANKZF1Q9H8Y5 726 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 GLOD4Q9HC38 313 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 TUFT1Q9NNX1 390 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 PIH1D3Q9NQM4 214 aaKnown RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ENTPD7Q9NQZ7 604 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 P4HTMQ9NXG6 502 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 SPASTQ9UBP0 616 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 DDX25Q9UHL0 483 aaKnown RBP3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ZNF148Q9UQR1 794 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 CHST2Q9Y4C5 530 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 SCN9AQ15858 1988 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 XDHP47989 1333 aa3.9□□□□□ -1.79
IGHV3-29-201ENST00000604817 ZNF646O15015 1829 aaPredicted RBP3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 A0A1W2PPM1 405 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 TARSL2A2RTX5 802 aaKnown RBP3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 MYADML2A6NDP7 307 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 CGB1A6NKQ9 187 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 GRXCR1A8MXD5 290 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 FAM86B1E9PN63 330 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 BOLA2-SMG1P6H3BVE0 249 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 UBXN8O00124 270 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 LEFTY2O00292 366 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 RNASET2O00584 256 aaKnown RBP3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 EIF3DO15371 548 aaKnown RBP eCLIP3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 PTBP3O95758 552 aaKnown RBP3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 ELANEP08246 267 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 MMP2P08253 660 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 FAM86B2P0C5J1 330 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 MYL6BP14649 208 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 ZNF182P17025 639 aaPredicted RBP3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 KELP23276 732 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 ACRV1P26436 265 aa3.89□□□□□ -1.79
IGHV3-29-201ENST00000604817 ITPKBP27987 946 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms