RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PER3P56645 1201 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ACTR2P61160 394 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 STX1BP61266 288 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RNF4P78317 190 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TUSC3Q13454 348 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 BOP1Q14137 746 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC39A14Q15043 492 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM189A2Q15884 450 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TBRG1Q3YBR2 411 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PITRM1Q5JRX3 1037 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 STYK1Q6J9G0 422 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TMC5Q6UXY8 1006 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 FRA10AC1Q70Z53 315 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 CHST9Q7L1S5 443 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PROSER1Q86XN7 944 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 KIF18BQ86Y91 864 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 CCDC36Q8IYA8 594 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ADGRG5Q8IZF4 528 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ANKRD13CQ8N6S4 541 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RCBTB1Q8NDN9 531 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 C17orf47Q8NEP4 570 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 WDR48Q8TAF3 677 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ADAMTS16Q8TE57 1224 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TSPAN17Q96FV3 270 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RMND5BQ96G75 393 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PLPPR2Q96GM1 343 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF486Q96H40 463 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PHACTR3Q96KR7 559 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 MRGPRX3Q96LB0 322 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF641Q96N77 438 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 POP1Q99575 1024 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 VRK1Q99986 396 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PHF7Q9BWX1 381 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF717Q9BY31 904 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF341Q9BYN7 854 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ARMC7Q9H6L4 198 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TLE6Q9H808 572 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 IL1RAPL2Q9NP60 686 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 GDF3Q9NR23 364 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PTGFRNQ9P2B2 879 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 CNOT8Q9UFF9 292 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ENOPH1Q9UHY7 261 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 FBXW2Q9UKT8 454 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SNX7Q9UNH6 387 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ARL2BPQ9Y2Y0 163 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PCDHA3Q9Y5H8 950 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SRPRBQ9Y5M8 271 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PSME4Q14997 1843 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 CCDC160A6NGH7 325 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TRAFD1O14545 582 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 CASC3O15234 703 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TNFSF14O43557 240 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 GATCO43716 136 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RNASEH1O60930 286 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SCGB2A1O75556 95 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ASS1P00966 412 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RPS17P08708 135 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 IGFBP1P08833 259 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TRHRP34981 398 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ENTPD1P49961 510 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SRSF5Q13243 272 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 LAPTM4AQ15012 233 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 C9orf152Q5JTZ5 239 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RNF43Q68DV7 783 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 DUPD1Q68J44 220 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 BLOC1S2Q6QNY1 142 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 WDR88Q6ZMY6 472 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 OVCH1Q7RTY7 1134 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 USP37Q86T82 979 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 MB21D2Q8IYB1 491 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 XXYLT1Q8NBI6 393 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 CCNYQ8ND76 341 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 BBS1Q8NFJ9 593 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 BRIX1Q8TDN6 353 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RFKQ969G6 155 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF775Q96BV0 537 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SERPINB12Q96P63 405 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 LMF1Q96S06 567 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ECSITQ9BQ95 431 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 MRPS26Q9BYN8 205 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TTYH3Q9C0H2 523 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 MKRN2Q9H000 416 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SMG9Q9H0W8 520 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 KCNK13Q9HB14 408 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SP110Q9HB58 689 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 KCNH7Q9NS40 1196 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SIRT3Q9NTG7 399 aaPredicted RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 DNAJB4Q9UDY4 337 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ENPP5Q9UJA9 477 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 POU2F3Q9UKI9 436 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 LIPT1Q9Y234 373 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 VWA7Q9Y334 891 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF451Q9Y4E5 1061 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RBM8AQ9Y5S9 174 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 LAMB1P07942 1786 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ADAMTSL1Q8N6G6 1762 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 MYH7BA7E2Y1 1941 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ADGRB1O14514 1584 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 PRSS44E7EML9 344 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms