RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CLEC18CQ8NCF0 446 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 CCDC42Q96M95 316 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 PACSIN1Q9BY11 444 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 IL26Q9NPH9 171 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 LNPEPQ9UIQ6 1025 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 MAN2B2Q9Y2E5 1009 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 MRPS18BQ9Y676 258 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 TEX15Q9BXT5 2789 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 SYCE3A1L190 88 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 PIPSLA2A3N6 862 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 OR52A4PA6NMU1 304 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 PMPCBO75439 489 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 POP7O75817 140 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 MT-CYBP00156 380 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 GP1BBP13224 206 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 HLA-DPA1P20036 260 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 PTPN3P26045 913 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 SPAM1P38567 509 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 ARL4DP49703 201 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 PMS2P54278 862 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 DNASE1L3Q13609 305 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 ERV3-1Q14264 604 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 SEPT7Q16181 437 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 LONRF2Q1L5Z9 754 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 PLA2G4EQ3MJ16 856 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 FAM26EQ8N5C1 309 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 SPATA22Q8NHS9 363 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 RSC1A1Q92681 617 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 CEP41Q9BYV8 373 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 IL17CQ9P0M4 197 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 ACSL5Q9ULC5 683 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 PKP3Q9Y446 797 aa17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 USP9XQ93008 2570 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-227ENST00000602011 RP1L1Q8IWN7 2480 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 K7EM74 188 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 MTX2O75431 263 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 SLC4A1P02730 911 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 KRT1P04264 644 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 DRG2P55039 364 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 WNT3AP56704 352 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 RPS15P62841 145 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 MPP3Q13368 585 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 PRKD1Q15139 912 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 TMTC4Q5T4D3 741 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 METRNLQ641Q3 311 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 FAM92BQ6ZTR7 304 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 ASB18Q6ZVZ8 466 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 DDHD1Q8NEL9 900 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 RNF25Q96BH1 459 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 FCRL5Q96RD9 977 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 FERMT1Q9BQL6 677 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 TWSG1Q9GZX9 223 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 SMOXQ9NWM0 555 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 TRHDEQ9UKU6 1024 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 TMPRSS11EQ9UL52 423 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 SPO11Q9Y5K1 396 aa17.45■□□□□ 0.38
SHKBP1-227ENST00000602011 SPTAN1Q13813 2472 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 GLYATL1P3A0A0U1RQE8 302 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 AURKAO14965 403 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 KIF1CO43896 1103 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 HSD11B2P80365 405 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 TUBB3Q13509 450 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 SEMA5AQ13591 1074 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 RPE65Q16518 533 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 PPP2R5EQ16537 467 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 TAZQ16635 292 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 KHDC1Q4VXA5 237 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 NPNTQ6UXI9 565 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 SYVN1Q86TM6 617 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 TTC30BQ8N4P2 665 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 P3H4Q92791 437 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 MIB2Q96AX9 1013 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 C19orf43Q9BQ61 176 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 SYTL2Q9HCH5 934 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 BPIFA1Q9NP55 256 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 TP53TG5Q9Y2B4 290 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 WDR37Q9Y2I8 494 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 PCDHGB7Q9Y5F8 929 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 COLEC10Q9Y6Z7 277 aa17.44■□□□□ 0.38
SHKBP1-227ENST00000602011 UBA6A0AVT1 1052 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 BLACEA4D250 179 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 CDC14CA4D256 554 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 TLCD2A6NGC4 264 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 HACD1B0YJ81 288 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 PTMSP20962 102 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 NDUFS1P28331 727 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 PTPN4P29074 926 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 CDKN2BP42772 138 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 TUBB4BP68371 445 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 TUBB2AQ13885 445 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 SLC1A5Q15758 541 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 ARMC6Q6NXE6 501 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 TMEM220Q6QAJ8 160 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 KDELC1Q6UW63 502 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 PID1Q7Z2X4 250 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 GLT6D1Q7Z4J2 308 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 OOSP2Q86WS3 158 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 D2HGDHQ8N465 521 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 RASGEF1AQ8N9B8 481 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 ELMO2Q96JJ3 720 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms