RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 FAM167BQ9BTA0 163 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 NAT9Q9BTE0 207 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 MCMBPQ9BTE3 642 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 P2RY12Q9H244 342 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 ACSS3Q9H6R3 686 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 CAB39LQ9H9S4 337 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 ZDHHC3Q9NYG2 299 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 ZFATQ9P243 1243 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 SLC23A2Q9UGH3 650 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 MOSPD1Q9UJG1 213 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 FBXO5Q9UKT4 447 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 SUFUQ9UMX1 484 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 WASF3Q9UPY6 502 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 APOBEC2Q9Y235 224 aaKnown RBP9.51□□□□□ -0.89
DDX39A-220ENST00000593008 MED16Q9Y2X0 877 aa9.51□□□□□ -0.89
DDX39A-220ENST00000593008 ACACBO00763 2458 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 TPRP12270 2363 aaKnown RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 AKAP13Q12802 2813 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 IGLV3-16A0A075B6K0 115 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 HMX2A2RU54 273 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 POC1B-GALNT4F8VUJ3 575 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 CACNB4O00305 520 aaPredicted RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 SIGLEC6O43699 453 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 DNAJC6O75061 913 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 PIAS2O75928 621 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 AHSGP02765 367 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 ABHD2P08910 425 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 MYF5P13349 255 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 JUNDP17535 347 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 OGNP20774 298 aaKnown RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 STX2P32856 288 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 CSE1LP55060 971 aaKnown RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 CDKN2DP55273 166 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 CLDN6P56747 220 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 TUBB4BP68371 445 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 SHC2P98077 582 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 LAMB3Q13751 1172 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 ITGA9Q13797 1035 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 FRG1Q14331 258 aaKnown RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 BRD3Q15059 726 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 PACS1Q6VY07 963 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 C11orf96Q7Z7L8 435 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 PARGQ86W56 976 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 DCP2Q8IU60 420 aaKnown RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 CCNJLQ8IV13 435 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 HID1Q8IV36 788 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 DCAKDQ8WVC6 231 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 WDR92Q96MX6 357 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 TTC25Q96NG3 672 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 BIRC8Q96P09 236 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 PAFAH2Q99487 392 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 COPS8Q99627 209 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 OLFM1Q99784 485 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 FUT8Q9BYC5 575 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 UNKQ9C0B0 810 aaKnown RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 CARS2Q9HA77 564 aaKnown RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 CYP4F12Q9HCS2 524 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 PHPT1Q9NRX4 125 aaPredicted RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 RAD18Q9NS91 495 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 ZNF446Q9NWS9 450 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 GULP1Q9UBP9 304 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 SLC17A4Q9Y2C5 497 aa9.5□□□□□ -0.89
DDX39A-220ENST00000593008 MTO1Q9Y2Z2 717 aaKnown RBP9.5□□□□□ -0.89
DDX39A-220ENST00000593008 A0A087WUV0 522 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 EXOC1LA0A1B0GW35 172 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 PRSS38A1L453 326 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 CCDC151A5D8V7 595 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 C1QTNF9BB2RNN3 333 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 NDUFS3O75489 264 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 EML2O95834 649 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 CSF2P04141 144 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 C1QTNF9P0C862 333 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 ACP5P13686 325 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 NME1P15531 152 aaKnown RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 MSH3P20585 1137 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 SAT1P21673 171 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 AK4P27144 223 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 TEAD1P28347 426 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 PREPP48147 710 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 LEPRP48357 1165 aaKnown RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 CD151P48509 253 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 TMEM115Q12893 351 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 C1orf61Q13536 156 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 PTK2BQ14289 1009 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 GPR33Q49SQ1 333 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 ZDHHC20Q5W0Z9 365 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 MRNIPQ6NTE8 343 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 TMEM220Q6QAJ8 160 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 DHRS13Q6UX07 377 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 MACC1Q6ZN28 852 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 RAB44Q7Z6P3 723 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 CMC1Q7Z7K0 106 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 NLRP8Q86W28 1048 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 ZC3HC1Q86WB0 502 aaKnown RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 TRAPPC5Q8IUR0 188 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 RAVER1Q8IY67 606 aaKnown RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 CYP4X1Q8N118 509 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 MREGQ8N565 214 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 GPATCH11Q8N954 259 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 SIDT2Q8NBJ9 832 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms