RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PLA2G15Q8NCC3 412 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 DDHD1Q8NEL9 900 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 SAP25Q8TEE9 199 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 HEXDCQ8WVB3 486 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 ZIM3Q96PE6 472 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 PAFAH2Q99487 392 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 TEX101Q9BY14 249 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 ZNF446Q9NWS9 450 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 ZDHHC3Q9NYG2 299 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 SLC17A6Q9P2U8 582 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 HS3ST3A1Q9Y663 406 aa16.39■□□□□ 0.21
GCDH-213ENST00000590627 SMG1Q96Q15 3661 aaKnown RBP16.38■□□□□ 0.21
GCDH-213ENST00000590627 PRAMEF26H0Y7S4 382 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 AHSGP02765 367 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 PCCBP05166 539 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 HOXC4P09017 264 aaPredicted RBP16.38■□□□□ 0.21
GCDH-213ENST00000590627 IGFALSP35858 605 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 MSH2P43246 934 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 ARRB1P49407 418 aaPredicted RBP16.38■□□□□ 0.21
GCDH-213ENST00000590627 MPP1Q00013 466 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 ZNF844Q08AG5 666 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 IFFO1Q0D2I5 559 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 SHBQ15464 509 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 LDLRAP1Q5SW96 308 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 GPRC6AQ5T6X5 926 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 GRTP1Q5TC63 336 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 ADGRD1Q6QNK2 874 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 PACS1Q6VY07 963 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 STRA8Q7Z7C7 330 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 CROCCP2Q86T23 111 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 LDB1Q86U70 411 aaPredicted RBP16.38■□□□□ 0.21
GCDH-213ENST00000590627 MARCH9Q86YJ5 346 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 GATAD2AQ86YP4 633 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 OR2W6PQ8NHA6 318 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 DCAKDQ8WVC6 231 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 LPGAT1Q92604 370 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 COX14Q96I36 57 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 HIC2Q96JB3 615 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 SERAC1Q96JX3 654 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 ERVMER34-1Q9H9K5 563 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 EURLQ9NYK6 297 aa16.38■□□□□ 0.21
GCDH-213ENST00000590627 A0A087WV48 116 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 FAM149AA5PLN7 773 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 POC1B-GALNT4F8VUJ3 575 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 TLR4O00206 839 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 TOR1BO14657 336 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 FPGTO14772 594 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 RASGRF2O14827 1237 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 ATP8B1O43520 1251 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 NDUFS3O75489 264 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 LDOC1O95751 146 aaPredicted RBP16.37■□□□□ 0.21
GCDH-213ENST00000590627 INHBAP08476 426 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 RPS3P23396 243 aaKnown RBP eCLIP16.37■□□□□ 0.21
GCDH-213ENST00000590627 EPHA8P29322 1005 aaPredicted RBP16.37■□□□□ 0.21
GCDH-213ENST00000590627 RXRGP48443 463 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 CD151P48509 253 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 SERPINB9P50453 376 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 NXPH1P58417 271 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 CDK3Q00526 305 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 INPP5AQ14642 412 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 SOWAHCQ53LP3 525 aaPredicted RBP16.37■□□□□ 0.21
GCDH-213ENST00000590627 CCDC157Q569K6 752 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 PRAMEF14Q5SWL7 426 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 ZC3HC1Q86WB0 502 aaKnown RBP16.37■□□□□ 0.21
GCDH-213ENST00000590627 PHYKPLQ8IUZ5 450 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 RBFAQ8N0V3 343 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 MFSD2AQ8NA29 543 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 FAM174AQ8TBP5 190 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 CNDP2Q96KP4 475 aaKnown RBP16.37■□□□□ 0.21
GCDH-213ENST00000590627 COPS8Q99627 209 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 RBBP8Q99708 897 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 RHOJQ9H4E5 214 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 FBXO6Q9NRD1 293 aaPredicted RBP16.37■□□□□ 0.21
GCDH-213ENST00000590627 TXNDC16Q9P2K2 825 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 CORO1CQ9ULV4 474 aaPredicted RBP16.37■□□□□ 0.21
GCDH-213ENST00000590627 IKBKGQ9Y6K9 419 aa16.37■□□□□ 0.21
GCDH-213ENST00000590627 PRMT5O14744 637 aaPredicted RBP16.36■□□□□ 0.21
GCDH-213ENST00000590627 MAGEC1O60732 1142 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 CDH16O75309 829 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 RFPL3O75679 317 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 FAM155BO75949 473 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 HAUS5O94927 633 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 SLC25A14O95258 325 aaPredicted RBP16.36■□□□□ 0.21
GCDH-213ENST00000590627 ZNF7P17097 686 aaPredicted RBP16.36■□□□□ 0.21
GCDH-213ENST00000590627 CNTFP26441 200 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 SPRP35270 261 aaPredicted RBP16.36■□□□□ 0.21
GCDH-213ENST00000590627 PFN3P60673 137 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 OVGP1Q12889 678 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 ZNF789Q5FWF6 425 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 CNSTQ6PJW8 725 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 ABI3BPQ7Z7G0 1075 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 IQCHQ86VS3 1027 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 HEATR4Q86WZ0 1026 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 RIBC1Q8N443 379 aaPredicted RBP16.36■□□□□ 0.21
GCDH-213ENST00000590627 EPS8L3Q8TE67 593 aaKnown RBP16.36■□□□□ 0.21
GCDH-213ENST00000590627 PKNOX2Q96KN3 472 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 BMFQ96LC9 184 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 P2RY12Q9H244 342 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 WDR26Q9H7D7 661 aa16.36■□□□□ 0.21
GCDH-213ENST00000590627 TRIM39Q9HCM9 518 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms