RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 H3BMM5 538 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 IFRD1O00458 451 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 COCHO43405 550 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ECI2O75521 394 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 RNASEH2AO75792 299 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 STC2O76061 302 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 MT-CO1P00395 513 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 C1RP00736 705 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 HSD17B1P14061 328 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CD1EP15812 388 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF7P17097 686 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ATF6P18850 670 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CR2P20023 1033 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 MRPL19P49406 292 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 RGS4P49798 205 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 TIAL1Q01085 375 aaKnown RBP eCLIP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CACNG1Q06432 222 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 PWP1Q13610 501 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 SEMA3AQ14563 771 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 RBBP5Q15291 538 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 TSNQ15631 228 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 VPS26BQ4G0F5 336 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ATP6AP1LQ52LC2 224 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 LYPLAL1Q5VWZ2 237 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 PRR23BQ6ZRT6 265 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ZBTB49Q6ZSB9 765 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ADAMTSL2Q86TH1 951 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 FUNDC1Q8IVP5 155 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 PACRGLQ8N7B6 248 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 EFHBQ8N7U6 833 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 TMEM102Q8N9M5 508 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF461Q8TAF7 563 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 HPS1Q92902 700 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 FUBP1Q96AE4 644 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 C3orf30Q96M34 536 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 FAM126AQ9BYI3 521 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 GPR63Q9BZJ6 419 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CRISPLD1Q9H336 500 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF696Q9H7X3 374 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ACTR3BQ9P1U1 418 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 PADI4Q9UM07 663 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 TTC3P53804 2025 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 DNAH12Q6ZR08 3092 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CCDC154A6NI56 674 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 TNFRSF10AO00220 468 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 KLK8O60259 260 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 GMNNO75496 209 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 SLC22A3O75751 556 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 GPIP06744 558 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 RPS17P08708 135 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ALDOCP09972 364 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 UMPSP11172 480 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 BMP2P12643 396 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 FASP25445 335 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ARL1P40616 181 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 GRIA3P42263 894 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 NR1H2P55055 460 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ERVK-8P63133 956 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 RALGDSQ12967 914 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CYTH1Q15438 398 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 PLEKHG6Q3KR16 790 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 RETSATQ6NUM9 610 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 C8orf82Q6P1X6 216 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 PRSS55Q6UWB4 352 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 RSPO2Q6UXX9 243 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CYP2R1Q6VVX0 501 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 GPRIN3Q6ZVF9 776 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 LILRA2Q8N149 483 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 MDGA1Q8NFP4 955 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 OR9I1Q8NGQ6 314 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 LRRC58Q96CX6 371 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 TRMT2BQ96GJ1 504 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 PDLIM5Q96HC4 596 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 MYRFLQ96LU7 910 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF597Q96LX8 424 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 BIRC8Q96P09 236 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 UHRF1Q96T88 793 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 GPATCH1Q9BRR8 931 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CLPBQ9H078 707 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 MAGEE1Q9HCI5 957 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 FBRSL1Q9HCM7 1045 aaKnown RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 CCM2LQ9NUG4 571 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 NUDT4Q9NZJ9 180 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 ABCD2Q9UBJ2 740 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 POLG2Q9UHN1 485 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 LEF1Q9UJU2 399 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-206ENST00000589117 APPL1Q9UKG1 709 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 SPO11Q9Y5K1 396 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-206ENST00000589117 DHRS12A0PJE2 317 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 H3BNC9 293 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 PRMT5O14744 637 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-206ENST00000589117 RAD51BO15315 384 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 NBNO60934 754 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 GJB3O75712 270 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 TMCC1O94876 653 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF26P17031 533 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-206ENST00000589117 HMGCLP35914 325 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms