RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TBC1D3GQ6DHY5 549 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D3CQ6IPX1 549 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TRIM67Q6ZTA4 783 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 PIGWQ7Z7B1 504 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 ADGRG6Q86SQ4 1221 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D3Q8IZP1 549 aaPredicted RBP25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 SLC17A9Q9BYT1 436 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 ZNF395Q9H8N7 513 aaPredicted RBP25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 USP36Q9P275 1121 aaKnown RBP25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 EBF1Q9UH73 591 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 CCDC189A1A4V9 331 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 NPEPPSL1A6NEC2 478 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 FAM170BA6NMN3 283 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 KERAO60938 352 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 PCCBP05166 539 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 MTHFD2P13995 350 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 DGKAP23743 735 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 ARRB2P32121 409 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 PRLHRP49683 370 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 PPP2CBP62714 309 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 PPP2CAP67775 309 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 IRF4Q15306 451 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 ATG14Q6ZNE5 492 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 PIWIL4Q7Z3Z4 852 aaKnown RBP25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 BEND7Q8N7W2 519 aaPredicted RBP25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 PPP1R14CQ8TAE6 165 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 STAG3L4Q8TBR4 150 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 KLK6Q92876 244 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 HIC2Q96JB3 615 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 GATA5Q9BWX5 397 aaPredicted RBP25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 EPHX3Q9H6B9 360 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 TRIM39Q9HCM9 518 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 ITM2CQ9NQX7 267 aa25.63■■□□□ 1.69
SCAMP4-210ENST00000588555 A8MT66 165 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 BTN3A1O00481 513 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 TEAD1P28347 426 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 ACSL1P33121 698 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 RGS4P49798 205 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 PRKAA2P54646 552 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 TTLL9Q3SXZ7 439 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 HEATR4Q86WZ0 1026 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 UBALD2Q8IYN6 164 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 FUBP1Q96AE4 644 aaKnown RBP25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 C7orf26Q96N11 449 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 NELL2Q99435 816 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 ZCCHC2Q9C0B9 1178 aaKnown RBP25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 VCANP13611 3396 aa25.62■■□□□ 1.69
SCAMP4-210ENST00000588555 FTH1P02794 183 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 TRIM23P36406 574 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 DNAJB13P59910 316 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 SGCGQ13326 291 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 SREK1Q8WXA9 508 aaKnown RBP25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 ELAC2Q9BQ52 826 aaKnown RBP25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 OR2AG1Q9H205 316 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 THAP1Q9NVV9 213 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 ATXN10Q9UBB4 475 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 F8W8V4 182 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 ITM2AO43736 263 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 SNX3O60493 162 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 LILRB5O75023 590 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 ATG13O75143 517 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 H2AFYO75367 372 aaKnown RBP25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 CDK14O94921 469 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 IGLV3-19P01714 112 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 CBSLP0DN79 551 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 CBSP35520 551 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 CDK3Q00526 305 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 NFKB2Q00653 900 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 BCL7AQ4VC05 210 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 TMEM31Q5JXX7 168 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 CYHR1Q6ZMK1 362 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 ASB12Q8WXK4 309 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 CCDC126Q96EE4 140 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 TEX101Q9BY14 249 aa25.61■■□□□ 1.69
SCAMP4-210ENST00000588555 C10orf142B7Z368 130 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 EIF3FO00303 357 aaPredicted RBP25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 RAD51BO15315 384 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 IPO13O94829 963 aaKnown RBP25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 SLC1A6P48664 564 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 INPP5AQ14642 412 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 TMEM220Q6QAJ8 160 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 GRAMD1AQ96CP6 724 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 LGR4Q9BXB1 951 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 BTBD1Q9H0C5 482 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 RNF112Q9ULX5 631 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 CDYLQ9Y232 598 aa25.6■■□□□ 1.69
SCAMP4-210ENST00000588555 TMEM202A6NGA9 273 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 UBXN8O00124 270 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 VEGFDO43915 354 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 LYPLA1O75608 230 aaPredicted RBP25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 MAT2AP31153 395 aaKnown RBP25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 NAGLUP54802 743 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 ZNF658BQ4V348 819 aaPredicted RBP25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 PLEKHS1Q5SXH7 462 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 SBSNQ6UWP8 590 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 MYO1HQ8N1T3 1032 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 MOCOSQ96EN8 888 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D17Q9HA65 648 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 CYP4F12Q9HCS2 524 aa25.59■■□□□ 1.69
SCAMP4-210ENST00000588555 TSR3Q9UJK0 312 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms