RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 C4orf17Q53FE4 359 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 TEX44Q53QW1 395 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 AMZ2Q86W34 360 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 KMT5CQ86Y97 462 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 GDAP1Q8TB36 358 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 OLFM3Q96PB7 478 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 GLOD4Q9HC38 313 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 IL26Q9NPH9 171 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 UNC79Q9P2D8 2635 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 HIVEP3Q5T1R4 2406 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 SHANK1Q9Y566 2161 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 A0A0A6YYK5 440 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-213ENST00000587604 TTLL8A6PVC2 850 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 VPS4BO75351 444 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 PMPCBO75439 489 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 POP7O75817 140 aaKnown RBP13.76□□□□□ -0.21
DNMT1-213ENST00000587604 DNAJB5O75953 348 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 GYPCP04921 128 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 PTPN4P29074 926 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 HNRNPH3P31942 346 aaKnown RBP13.76□□□□□ -0.21
DNMT1-213ENST00000587604 RPS15P62841 145 aaKnown RBP13.76□□□□□ -0.21
DNMT1-213ENST00000587604 TPM4P67936 248 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 MESDQ14696 234 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 KCNAB1Q14722 419 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 RPE65Q16518 533 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 SLC18A3Q16572 532 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 ZDHHC20Q5W0Z9 365 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 GALNT11Q8NCW6 608 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 TEKT5Q96M29 485 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 CD180Q99467 661 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 MAP3K3Q99759 626 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 PACSIN1Q9BY11 444 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 TRIM55Q9BYV6 548 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 ZCCHC2Q9C0B9 1178 aaKnown RBP13.76□□□□□ -0.21
DNMT1-213ENST00000587604 TRABDQ9H4I3 376 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 AKIRIN1Q9H9L7 192 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-213ENST00000587604 FGF21Q9NSA1 209 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
DNMT1-213ENST00000587604 VPS4AQ9UN37 437 aa13.76□□□□□ -0.21
DNMT1-213ENST00000587604 DNMT3AQ9Y6K1 912 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-213ENST00000587604 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 EPOP01588 193 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 EBLN1P0CF75 366 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 HSD11B2P80365 405 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 PDE1BQ01064 536 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 LDLRAP1Q5SW96 308 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 FAM199XQ6PEV8 388 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-213ENST00000587604 NPNTQ6UXI9 565 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 SYVN1Q86TM6 617 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 D2HGDHQ8N465 521 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 EFCAB3Q8N7B9 438 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 RASGEF1AQ8N9B8 481 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 GPR150Q8NGU9 434 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 ZNF514Q96K75 400 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-213ENST00000587604 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 MLXIPLQ9NP71 852 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 UBP1Q9NZI7 540 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 PCDHGA9Q9Y5G4 932 aaKnown RBP13.75□□□□□ -0.21
DNMT1-213ENST00000587604 CREBBPQ92793 2442 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 CACNA1DQ01668 2161 aa13.75□□□□□ -0.21
DNMT1-213ENST00000587604 CENPEQ02224 2701 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UBA6A0AVT1 1052 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-213ENST00000587604 OR5K3A6NET4 321 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 TLCD2A6NGC4 264 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UGT1A9O60656 530 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 TMEM253P0C7T8 217 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UGT1A6P19224 532 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UGT1A1P22309 533 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UGT1A4P22310 534 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 PTPN3P26045 913 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 SPAM1P38567 509 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 ARHGAP25P42331 645 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UQCRFS1P47985 274 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 ARL4DP49703 201 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 PGDP52209 483 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 CTSCP53634 463 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 TUBB4BP68371 445 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 LAMB3Q13751 1172 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 TUBB2AQ13885 445 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 PLCL1Q15111 1095 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 CHRNA6Q15825 494 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 DNTTIP2Q5QJE6 756 aaKnown RBP13.74□□□□□ -0.21
DNMT1-213ENST00000587604 FHL5Q5TD97 284 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 METRNLQ641Q3 311 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 CAPRIN2Q6IMN6 1127 aaKnown RBP13.74□□□□□ -0.21
DNMT1-213ENST00000587604 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
DNMT1-213ENST00000587604 TMEM220Q6QAJ8 160 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 CERS6Q6ZMG9 384 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 ZNF517Q6ZMY9 492 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-213ENST00000587604 FAM83HQ6ZRV2 1179 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-213ENST00000587604 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 BZW1Q7L1Q6 419 aaKnown RBP13.74□□□□□ -0.21
DNMT1-213ENST00000587604 LUZP1Q86V48 1076 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 RFX6Q8HWS3 928 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 TTC30BQ8N4P2 665 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 OR8K5Q8NH50 307 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 SLC35G2Q8TBE7 412 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 CPT1CQ8TCG5 803 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 ZFPM2Q8WW38 1151 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 SLC25A23Q9BV35 468 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms