RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 PNOCQ13519 176 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 RUNX2Q13950 521 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ARHGEF6Q15052 776 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 HSPB2Q16082 182 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ZSCAN26Q16670 478 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 SOWAHAQ2M3V2 549 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 SPATA1Q5VX52 437 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ZNF772Q68DY9 489 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 WDR73Q6P4I2 378 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 CTR9Q6PD62 1173 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 C19orf48Q6RUI8 117 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 IL20RBQ6UXL0 311 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ESX1Q8N693 406 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 CNNM3Q8NE01 707 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 SMARCE1Q969G3 411 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ZBTB10Q96DT7 871 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 FAM167BQ9BTA0 163 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 TWSG1Q9GZX9 223 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 LMAN2LQ9H0V9 348 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ANKZF1Q9H8Y5 726 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 VIPAS39Q9H9C1 493 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ZCCHC17Q9NP64 241 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 BLOC1S4Q9NUP1 217 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 MAN1B1Q9UKM7 699 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 KDM6AO15550 1401 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 SNED1Q8TER0 1413 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 C4AP0C0L4 1744 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 C4BP0C0L5 1744 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 C5P01031 1676 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 LRP6O75581 1613 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 A6NCN8 305 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 ERI2A8K979 691 aaKnown RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 POLR3GO15318 223 aaPredicted RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 ZBTB43O43298 467 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 EDIL3O43854 480 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 TIPRLO75663 272 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 SEC31AO94979 1220 aaKnown RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 MMP1P03956 469 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 PCCAP05165 728 aaPredicted RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 IVLP07476 585 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 CCDC175P0C221 793 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 MCM3P25205 808 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 CNTFP26441 200 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 OAS2P29728 719 aaKnown RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 MARCKSP29966 332 aaPredicted RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 ADD2P35612 726 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 TIMP3P35625 211 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 AARSP49588 968 aaKnown RBP eCLIP4□□□□□ -1.77
SMCHD1-208ENST00000583344 METAP2P50579 478 aaKnown RBP eCLIP4□□□□□ -1.77
SMCHD1-208ENST00000583344 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 TRIM29Q14134 588 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 SYT16Q17RD7 645 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 WHAMMP3Q1A5X7 153 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 FILIP1LQ4L180 1135 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 RILPL1Q5EBL4 403 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 DENND1BQ6P3S1 775 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 MOB3CQ70IA8 216 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 CHST3Q7LGC8 479 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 PRSS45Q7RTY3 260 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 TBC1D1Q86TI0 1168 aaPredicted RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 TMTC1Q8IUR5 882 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 ODF3L1Q8IXM7 274 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 TTC5Q8N0Z6 440 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 GJC3Q8NFK1 279 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 THAP4Q8WY91 577 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 DHX58Q96C10 678 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 CCDC34Q96HJ3 373 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 DUX3Q96PT4 197 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 GSDMAQ96QA5 445 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 CLSTN3Q9BQT9 956 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 GFRA4Q9GZZ7 299 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 CSTL1Q9H114 145 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 SLC32A1Q9H598 525 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 ZNF696Q9H7X3 374 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 FBRSL1Q9HCM7 1045 aaKnown RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 SAYSD1Q9NPB0 183 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 UBN1Q9NPG3 1134 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 TBC1D22BQ9NU19 505 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 AATFQ9NY61 560 aaKnown RBP eCLIP4□□□□□ -1.77
SMCHD1-208ENST00000583344 C1RLQ9NZP8 487 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 RAI14Q9P0K7 980 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 ADD3Q9UEY8 706 aaKnown RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 LIMA1Q9UHB6 759 aaKnown RBP4□□□□□ -1.77
SMCHD1-208ENST00000583344 TMEM98Q9Y2Y6 226 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 DERAQ9Y315 318 aa4□□□□□ -1.77
SMCHD1-208ENST00000583344 ARFGEF2Q9Y6D5 1785 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 MROH7-TTC4A0A0A0MT08 1334 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 TRPM3Q9HCF6 1732 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 ATRNO75882 1429 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 A0A0U1RQF3 1178 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 ERICH4A6NGS2 130 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 KLRF2D3W0D1 207 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 POLR2DO15514 142 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 GPAA1O43292 621 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 PLRG1O43660 514 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 KIF5CO60282 957 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 RFPL2O75678 378 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 FAM155BO75949 473 aa3.99□□□□□ -1.77
SMCHD1-208ENST00000583344 TBX6O95947 436 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms