RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 NUDT22Q9BRQ3 303 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CCM2Q9BSQ5 444 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 KCNF1Q9H3M0 494 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 SEMA6CQ9H3T2 930 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 IMP3Q9NV31 184 aaKnown RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 SMOXQ9NWM0 555 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 ZDHHC3Q9NYG2 299 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 SAMD15Q9P1V8 674 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 DKK4Q9UBT3 224 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 KLHL3Q9UH77 587 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 ACSL5Q9ULC5 683 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 TTC7AQ9ULT0 858 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 LOXL2Q9Y4K0 774 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 PCDHB11Q9Y5F2 797 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 COLEC10Q9Y6Z7 277 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 TDRD6O60522 2096 aaKnown RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 URB1O60287 2271 aaKnown RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 IGHV5-10-1A0A0J9YXX1 117 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CCDC162PA2VCL2 907 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 MROH6A6NGR9 719 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 OR51F1A6NGY5 319 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TAF4O00268 1085 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 IFRD1O00458 451 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 GAPDHSO14556 408 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 PFDN6O15212 129 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 ZNF185O15231 689 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 KLK10O43240 276 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 RASSF9O75901 435 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 UBXN7O94888 489 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 OR56A5P0C7T3 313 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 HOXB3P14651 431 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TCP1P17987 556 aaKnown RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 ACRV1P26436 265 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CCKBRP32239 447 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 COILP38432 576 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 EIF2S3P41091 472 aaKnown RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SLC19A1P41440 591 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 PAFAH1B1P43034 410 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 ARL4DP49703 201 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CDKN1CP49918 316 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 PCBP4P57723 403 aaKnown RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CRADDP78560 199 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 XIAPP98170 497 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CDK16Q00536 496 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 NFE2L1Q14494 772 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 BRD3Q15059 726 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SIX1Q15475 284 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 RPE65Q16518 533 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TBC1D25Q3MII6 688 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SYTL3Q4VX76 610 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 AARS2Q5JTZ9 985 aaKnown RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TSTD2Q5T7W7 516 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 AGAP9Q5VTM2 703 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 METRNLQ641Q3 311 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 IRGCQ6NXR0 463 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TMEM71Q6P5X7 295 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 WDR74Q6RFH5 385 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 AFTPHQ6ULP2 937 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 ABRAXAS1Q6UWZ7 409 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 WASH2PQ6VEQ5 465 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CERS6Q6ZMG9 384 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TMEM26Q6ZUK4 368 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SDCCAG8Q86SQ7 713 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 RBM12BQ8IXT5 1001 aaKnown RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 RASGEF1CQ8N431 466 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CLDN19Q8N6F1 224 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 GLIS1Q8NBF1 620 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 AGBL5Q8NDL9 886 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 RCBTB1Q8NDN9 531 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 ZNF248Q8NDW4 579 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 OR4D9Q8NGE8 314 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 OR2L2Q8NH16 312 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 OR4L1Q8NH43 312 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 COG1Q8WTW3 980 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 ZDHHC12Q96GR4 267 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 LIN37Q96GY3 246 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CCDC74BQ96LY2 380 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 C12orf66Q96MD2 445 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TGM7Q96PF1 710 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 FERD3LQ96RJ6 166 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 NAPGQ99747 312 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 C19orf43Q9BQ61 176 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TSSK1BQ9BXA7 367 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TBC1D10AQ9BXI6 508 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 IL22Q9GZX6 179 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 WWP1Q9H0M0 922 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 EPB41L1Q9H4G0 881 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SLC40A1Q9NP59 571 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CASS4Q9NQ75 786 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 WASH6PQ9NQA3 447 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CHRAC1Q9NRG0 131 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SLC39A1Q9NY26 324 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SCHIP1Q9P0W5 487 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 ZNF624Q9P2J8 865 aaPredicted RBP6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SLC2A6Q9UGQ3 507 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 SNX12Q9UMY4 172 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 TCAF1Q9Y4C2 921 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 PCDHGA8Q9Y5G5 932 aa6.43□□□□□ -1.38
TRAF4-213ENST00000578917 CFAP20Q9Y6A4 193 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms