RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 TRIM10Q9UDY6 481 aa6.75□□□□□ -1.33
SMARCE1-212ENST00000577721 CNOT6Q9ULM6 557 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-212ENST00000577721 G3BP2Q9UN86 482 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-212ENST00000577721 DNAJC16Q9Y2G8 782 aa6.75□□□□□ -1.33
SMARCE1-212ENST00000577721 SIK3Q9Y2K2 1263 aa6.75□□□□□ -1.33
SMARCE1-212ENST00000577721 PCDHGA6Q9Y5G7 932 aa6.75□□□□□ -1.33
SMARCE1-212ENST00000577721 SLC30A1Q9Y6M5 507 aa6.75□□□□□ -1.33
SMARCE1-212ENST00000577721 CHD5Q8TDI0 1954 aa6.75□□□□□ -1.33
SMARCE1-212ENST00000577721 UNC13CQ8NB66 2214 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 NAV2Q8IVL1 2488 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 SDK2Q58EX2 2172 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 SERTM1A2A2V5 107 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 A6NL46 340 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 FADS2P1A8MWK0 482 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 C21orf140B9A014 251 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 TOX3O15405 576 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 KIF1CO43896 1103 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 FZD6O60353 706 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 LRCH4O75427 683 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 MTA2O94776 668 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 RECKO95980 971 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 FGF5P12034 268 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 ATP1A3P13637 1013 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 ZNF8P17098 575 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 XRCC1P18887 633 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 CES1P23141 567 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 PTPN4P29074 926 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 SPINT3P49223 89 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 ZNF165P49910 485 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 RPS18P62269 152 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 UBE2IP63279 158 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 DSC2Q02487 901 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 TYRO3Q06418 890 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 MRPL49Q13405 166 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 UGT8Q16880 541 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 ALS2CLQ60I27 953 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 CPZQ66K79 652 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 FAM199XQ6PEV8 388 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 MAMDC2Q7Z304 686 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 POLNQ7Z5Q5 900 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 AOPEPQ8N6M6 819 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 SEC14L1Q92503 715 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 CSPG4P5Q96PW8 444 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 MLPHQ9BV36 600 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 GPR87Q9BY21 358 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 ING2Q9H160 280 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 ZNF768Q9H5H4 540 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 UCK1Q9HA47 277 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 PCDH9Q9HC56 1237 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 TRIM39Q9HCM9 518 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 FANCLQ9NW38 375 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 RARRES3Q9UL19 164 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 FARSAQ9Y285 508 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 ZNF451Q9Y4E5 1061 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 DOCK4Q8N1I0 1966 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 SCN8AQ9UQD0 1980 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 AHCTF1Q8WYP5 2266 aa6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 MN1Q10571 1320 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-212ENST00000577721 RGSL1A5PLK6 1076 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 LGALS16A8MUM7 142 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 TCP11X1B4DZS4 312 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 KMOO15229 486 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 ZNF185O15231 689 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 DPM1O60762 260 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 DEAF1O75398 565 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 TIAF1O95411 115 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 SLC4A1P02730 911 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 RNF224P0DH78 156 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 RARAP10276 462 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 FOLR1P15328 257 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 ZNF7P17097 686 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 NELFEP18615 380 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 IDSP22304 550 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 RPL10P27635 214 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 IL1R2P27930 398 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 PCK1P35558 622 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 DCTP40126 519 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 CLCNKAP51800 687 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 DRG2P55039 364 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 RPL26P61254 145 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 ACY1Q03154 408 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 TUBB3Q13509 450 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 KCNAB1Q14722 419 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 CHRNA6Q15825 494 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 ASIC2Q16515 512 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 DPYSL2Q16555 572 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 PRR30Q53SZ7 412 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 ZNF569Q5MCW4 686 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 HENMT1Q5T8I9 393 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 CDKAL1Q5VV42 579 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 TIGD7Q6NT04 549 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 PWWP2BQ6NUJ5 590 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 CYP4V2Q6ZWL3 525 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 PRSS42Q7Z5A4 293 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 IRF2BP2Q7Z5L9 587 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 SYVN1Q86TM6 617 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 LRRTM4Q86VH4 590 aa6.73□□□□□ -1.33
SMARCE1-212ENST00000577721 LRRC49Q8IUZ0 686 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms