RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 CTSCP53634 463 aa5□□□□□ -1.61
NUP88-213ENST00000576862 GAGE5Q13069 117 aa5□□□□□ -1.61
NUP88-213ENST00000576862 GAGE6Q13070 117 aa5□□□□□ -1.61
NUP88-213ENST00000576862 KRT81Q14533 505 aa5□□□□□ -1.61
NUP88-213ENST00000576862 TPRG1Q6ZUI0 275 aa5□□□□□ -1.61
NUP88-213ENST00000576862 PLEKHM3Q6ZWE6 761 aa5□□□□□ -1.61
NUP88-213ENST00000576862 TEX11Q8IYF3 940 aa5□□□□□ -1.61
NUP88-213ENST00000576862 LRRC8CQ8TDW0 803 aa5□□□□□ -1.61
NUP88-213ENST00000576862 HES6Q96HZ4 224 aa5□□□□□ -1.61
NUP88-213ENST00000576862 ZNF334Q9HCZ1 680 aaPredicted RBP5□□□□□ -1.61
NUP88-213ENST00000576862 DBNLQ9UJU6 430 aaKnown RBP5□□□□□ -1.61
NUP88-213ENST00000576862 RPS6KL1Q9Y6S9 549 aa5□□□□□ -1.61
NUP88-213ENST00000576862 SAMD9Q5K651 1589 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 FMN1Q68DA7 1419 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 MAP3K1Q13233 1512 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 ERVV-2B6SEH9 535 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 J3QR06 171 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 GPC4O75487 556 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 SLC22A3O75751 556 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 ZNF23P17027 643 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 CALRP27797 417 aaKnown RBP4.99□□□□□ -1.61
NUP88-213ENST00000576862 HOXA1P49639 335 aaPredicted RBP4.99□□□□□ -1.61
NUP88-213ENST00000576862 TERF1P54274 439 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 LINC01547P58512 204 aaPredicted RBP4.99□□□□□ -1.61
NUP88-213ENST00000576862 CD81P60033 236 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 PHEXP78562 749 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 ZNF534Q76KX8 674 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 PIWIL4Q7Z3Z4 852 aaKnown RBP4.99□□□□□ -1.61
NUP88-213ENST00000576862 GBGT1Q8N5D6 347 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 NUDCD1Q96RS6 583 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 TREX2Q9BQ50 279 aaPredicted RBP4.99□□□□□ -1.61
NUP88-213ENST00000576862 RCC2Q9P258 522 aaKnown RBP4.99□□□□□ -1.61
NUP88-213ENST00000576862 NENFQ9UMX5 172 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 FAF1Q9UNN5 650 aaPredicted RBP4.99□□□□□ -1.61
NUP88-213ENST00000576862 FYCO1Q9BQS8 1478 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 PCF11O94913 1555 aaKnown RBP4.99□□□□□ -1.61
NUP88-213ENST00000576862 IQGAP2Q13576 1575 aa4.99□□□□□ -1.61
NUP88-213ENST00000576862 DISP1Q96F81 1524 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 UGGT2Q9NYU1 1516 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 OR2M5A3KFT3 312 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 AGAP14A8MT82 685 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 ANKRD66B4E2M5 251 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 TMEM189-UBE2V1I3L0A0 370 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 AP3D1O14617 1153 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 DVL1O14640 695 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 VILLO15195 856 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 LINC01565O15544 149 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 CTSVO60911 334 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 TMCC2O75069 709 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 BAG4O95429 457 aaKnown RBP4.98□□□□□ -1.61
NUP88-213ENST00000576862 HSP90AA1P07900 732 aaKnown RBP4.98□□□□□ -1.61
NUP88-213ENST00000576862 CSF2RAP15509 400 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 DVL1P1P54792 670 aaPredicted RBP4.98□□□□□ -1.61
NUP88-213ENST00000576862 UBE2V1Q13404 147 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 ACVR2BQ13705 512 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 C4orf50Q6ZRC1 276 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 SLC26A9Q7LBE3 791 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 TRMT1LQ7Z2T5 733 aaKnown RBP4.98□□□□□ -1.61
NUP88-213ENST00000576862 GALNT13Q8IUC8 556 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 SCYL3Q8IZE3 742 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 FAM9BQ8IZU0 186 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 C1orf52Q8N6N3 182 aaKnown RBP4.98□□□□□ -1.61
NUP88-213ENST00000576862 SPATA3Q8NHX4 192 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 NR4A3Q92570 626 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 OXNAD1Q96HP4 312 aaPredicted RBP4.98□□□□□ -1.61
NUP88-213ENST00000576862 BARD1Q99728 777 aaKnown RBP4.98□□□□□ -1.61
NUP88-213ENST00000576862 LRRC9Q6ZRR7 1453 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 TIAM1Q13009 1591 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 PBRM1Q86U86 1689 aa4.98□□□□□ -1.61
NUP88-213ENST00000576862 RRBP1Q9P2E9 1410 aaKnown RBP4.97□□□□□ -1.61
NUP88-213ENST00000576862 CEP170Q5SW79 1584 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 A0A0G2JNG1 304 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 PRR23AA6NEV1 266 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 BUD23O43709 281 aaKnown RBP4.97□□□□□ -1.61
NUP88-213ENST00000576862 ANOS1P23352 680 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 DCTP40126 519 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 PSMB10P40306 273 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 AIMP2Q13155 320 aaKnown RBP4.97□□□□□ -1.61
NUP88-213ENST00000576862 KIR2DS5Q14953 304 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 MEP1AQ16819 746 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 GFI1BQ5VTD9 330 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 KLHDC9Q8NEP7 349 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 SCRN2Q96FV2 425 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 ABHD8Q96I13 439 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 ST6GAL2Q96JF0 529 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 SLX1AQ9BQ83 275 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 C1QTNF1Q9BXJ1 281 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 GHITMQ9H3K2 345 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 RAD21L1Q9H4I0 556 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 TRPC7Q9HCX4 862 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 SWAP70Q9UH65 585 aa4.97□□□□□ -1.61
NUP88-213ENST00000576862 CCNB3Q8WWL7 1395 aa4.96□□□□□ -1.62
NUP88-213ENST00000576862 FSD2A1L4K1 749 aa4.96□□□□□ -1.62
NUP88-213ENST00000576862 CCER2I3L3R5 266 aa4.96□□□□□ -1.62
NUP88-213ENST00000576862 PLK4O00444 970 aa4.96□□□□□ -1.62
NUP88-213ENST00000576862 ZBTB43O43298 467 aa4.96□□□□□ -1.62
NUP88-213ENST00000576862 PRKNO60260 465 aaPredicted RBP4.96□□□□□ -1.62
NUP88-213ENST00000576862 PDE9AO76083 593 aa4.96□□□□□ -1.62
NUP88-213ENST00000576862 GCNT3O95395 438 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms