RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 GAREM1Q9H706 876 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 MRPL40Q9NQ50 206 aaKnown RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 GPR27Q9NS67 375 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 MARCH4Q9P2E8 410 aaPredicted RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 SPASTQ9UBP0 616 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 GNPTGQ9UJJ9 305 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 RAB21Q9UL25 225 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 TMPRSS11EQ9UL52 423 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 MSRB2Q9Y3D2 182 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 NEUROG3Q9Y4Z2 214 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 PCDHB1Q9Y5F3 818 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 DNMT3AQ9Y6K1 912 aaPredicted RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 OAS3Q9Y6K5 1087 aaKnown RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 DGKBQ9Y6T7 804 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 PLXNB3Q9ULL4 1909 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 KLHL33A6NCF5 533 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 NEMP2A6NFY4 417 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 OR2AG2A6NM03 316 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 SH3BP5O60239 455 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 KCNJ13O60928 360 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 ZIC2O95409 532 aaPredicted RBP15.8■□□□□ 0.12
USB1-215ENST00000569252 FTH1P02794 183 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 FMO4P31512 558 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 GPX6P59796 221 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 EIF2B5Q13144 721 aaKnown RBP15.8■□□□□ 0.12
USB1-215ENST00000569252 ELOCQ15369 112 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 INSCQ1MX18 579 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 ALG11Q2TAA5 492 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 KLHL38Q2WGJ6 581 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 PRAMEF14Q5SWL7 426 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 TRMT10BQ6PF06 316 aaKnown RBP15.8■□□□□ 0.12
USB1-215ENST00000569252 PACS1Q6VY07 963 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 CHST15Q7LFX5 561 aaPredicted RBP15.8■□□□□ 0.12
USB1-215ENST00000569252 STRA8Q7Z7C7 330 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 DENND6AQ8IWF6 608 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 PHACTR4Q8IZ21 702 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 RASGEF1AQ8N9B8 481 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 C2CD4AQ8NCU7 369 aaPredicted RBP15.8■□□□□ 0.12
USB1-215ENST00000569252 MYRIPQ8NFW9 859 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 OR1E3Q8WZA6 343 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 SLC32A1Q9H598 525 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 FBXO6Q9NRD1 293 aaPredicted RBP15.8■□□□□ 0.12
USB1-215ENST00000569252 APOBEC3BQ9UH17 382 aaKnown RBP15.8■□□□□ 0.12
USB1-215ENST00000569252 CRYL1Q9Y2S2 319 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 COMMD10Q9Y6G5 202 aa15.8■□□□□ 0.12
USB1-215ENST00000569252 GCN1Q92616 2671 aaKnown RBP15.79■□□□□ 0.12
USB1-215ENST00000569252 IGLV3-16A0A075B6K0 115 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 E5RI56 91 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 ESR1P03372 595 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 GSTM1P09488 218 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 MYBL2P10244 700 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 NME1P15531 152 aaKnown RBP15.79■□□□□ 0.12
USB1-215ENST00000569252 SLC1A2P43004 574 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 LEPRP48357 1165 aaKnown RBP15.79■□□□□ 0.12
USB1-215ENST00000569252 RXRGP48443 463 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 EIF3BP55884 814 aaKnown RBP15.79■□□□□ 0.12
USB1-215ENST00000569252 GSTM4Q03013 218 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 ILF3Q12906 894 aaKnown RBP eCLIP15.79■□□□□ 0.12
USB1-215ENST00000569252 NAB1Q13506 487 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 LRP8Q14114 963 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 SEMA3AQ14563 771 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 NAA30Q147X3 362 aaPredicted RBP15.79■□□□□ 0.12
USB1-215ENST00000569252 BRD3Q15059 726 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 TYSND1Q2T9J0 566 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 PRRT3Q5FWE3 981 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 CRTC3Q6UUV7 619 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 AMZ2Q86W34 360 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 GKN2Q86XP6 184 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 CNTN4Q8IWV2 1026 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 SDR16C5Q8N3Y7 309 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 FSTL5Q8N475 847 aaPredicted RBP15.79■□□□□ 0.12
USB1-215ENST00000569252 PPM1NQ8N819 430 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 PANX3Q96QZ0 392 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 OR2M4Q96R27 311 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 CPNE1Q99829 537 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 CCM2Q9BSQ5 444 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 BOCQ9BWV1 1114 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 GSDMCQ9BYG8 508 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 FGF22Q9HCT0 170 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 ARGLU1Q9NWB6 273 aaPredicted RBP15.79■□□□□ 0.12
USB1-215ENST00000569252 TRNAU1APQ9NX07 287 aaKnown RBP15.79■□□□□ 0.12
USB1-215ENST00000569252 PLXNA2O75051 1894 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 DOCK9Q9BZ29 2069 aa15.79■□□□□ 0.12
USB1-215ENST00000569252 TMEM8BA6NDV4 472 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 CHUKO15111 745 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 KPNA5O15131 536 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 RIPK2O43353 540 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 OR1I1O60431 355 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 DNAJC6O75061 913 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 POP7O75817 140 aaKnown RBP15.78■□□□□ 0.12
USB1-215ENST00000569252 HAUS5O94927 633 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 S1PR4O95977 384 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 CAPNS1P04632 268 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 CHRM3P20309 590 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 RPS3P23396 243 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■□□□ 14.1
USB1-215ENST00000569252 CA5AP35218 305 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 CD151P48509 253 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 CCT8P50990 548 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 ADARP55265 1226 aaKnown RBP15.78■□□□□ 0.12
USB1-215ENST00000569252 UAP1Q16222 522 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms