RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	ZNF547	Q8IVP9	402 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	HM13	Q8TCT9	377 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	SLC44A1	Q8WWI5	657 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	VPS39	Q96JC1	886 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	BIRC8	Q96P09	236 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	PAFAH2	Q99487	392 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	RBBP8	Q99708	897 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	CCM2	Q9BSQ5	444 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	AARSD1	Q9BTE6	412 aa	Known RBP	11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	LRRC61	Q9BV99	259 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	SEMA4G	Q9NTN9	838 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	KLHL42	Q9P2K6	505 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	SLC17A6	Q9P2U8	582 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	SLC24A2	Q9UI40	661 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	ZNF180	Q9UJW8	692 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	GPSM3	Q9Y4H4	160 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	PSAT1	Q9Y617	370 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	DCHS1	Q96JQ0	3298 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	RALGAPA1	Q6GYQ0	2036 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	TMEM131	Q92545	1883 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	NEMP2	A6NFY4	417 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	MGAT4D	A6NG13	374 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	CXorf49	A8MYA2	514 aa	Predicted RBP	11.81	□□□□□ -0.52
FANCA-231	ENST00000568626		E5RI56	91 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	LIN7A	O14910	233 aa	Predicted RBP	11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	VPS26A	O75436	327 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	POP7	O75817	140 aa	Known RBP	11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	PIAS2	O75928	621 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	HAUS5	O94927	633 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	ACP5	P13686	325 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	GABRB3	P28472	473 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	FMO4	P31512	558 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	MSH2	P43246	934 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	LIMK2	P53671	638 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	IRX4	P78413	519 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	SPEM2	Q0P670	501 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.81	□□□□□ -0.52	6e-7	■■■■□ 22.4
FANCA-231	ENST00000568626	CCDC6	Q16204	474 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	INAVA	Q3KP66	663 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	TTLL9	Q3SXZ7	439 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	PRRT3	Q5FWE3	981 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	ZNF789	Q5FWF6	425 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	CTSL3P	Q5NE16	218 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	UBAP2	Q5T6F2	1119 aa	Known RBP	11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	FAM45BP	Q6NSW5	357 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	UGT3A1	Q6NUS8	523 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	CNST	Q6PJW8	725 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	C11orf96	Q7Z7L8	435 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	GKN2	Q86XP6	184 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	OR2L2	Q8NH16	312 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	FAM45A	Q8TCE6	357 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	GPBAR1	Q8TDU6	330 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	CCDC97	Q96F63	343 aa	Predicted RBP	11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	TSPAN17	Q96FV3	270 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	MCMBP	Q9BTE3	642 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	GTPBP2	Q9BX10	602 aa	Known RBP	11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	GAREM1	Q9H706	876 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	KLF15	Q9UIH9	416 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	PRSS21	Q9Y6M0	314 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	CSNK1G3	Q9Y6M4	447 aa		11.81	□□□□□ -0.52
FANCA-231	ENST00000568626	PIKFYVE	Q9Y2I7	2098 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	FAM95C	A0A1B0GW59	222 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	LMO7DN	F2Z398	122 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	EIF3F	O00303	357 aa	Predicted RBP	11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	AQP9	O43315	295 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	PCDHGA12	O60330	932 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	KRT38	O76015	456 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	FUCA1	P04066	466 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	APOA4	P06727	396 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	SLC2A4	P14672	509 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	SKIV2L2	P42285	1042 aa	Known RBP	11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	ARHGAP8	P85298	464 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	CTBS	Q01459	385 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	POU4F1	Q01851	419 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	RPA4	Q13156	261 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	RASA2	Q15283	850 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	SYTL3	Q4VX76	610 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	ZNF542P	Q5EBM4	170 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	LGSN	Q5TDP6	509 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	KCTD16	Q68DU8	428 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	TCEAL6	Q6IPX3	200 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	LVRN	Q6Q4G3	990 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	PRR23C	Q6ZRP0	262 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	CHST15	Q7LFX5	561 aa	Predicted RBP	11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	OTOA	Q7RTW8	1153 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	MINDY1	Q8N5J2	469 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	BEND7	Q8N7W2	519 aa	Predicted RBP	11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	PNPLA1	Q8N8W4	532 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	GPATCH11	Q8N954	259 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	ASZ1	Q8WWH4	475 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	ELMO1	Q92556	727 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	TCEAL3	Q969E4	200 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	GPR22	Q99680	433 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	DHRS4	Q9BTZ2	278 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	EDEM2	Q9BV94	578 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	TMEM168	Q9H0V1	697 aa		11.8	□□□□□ -0.52
FANCA-231	ENST00000568626	SMOC1	Q9H4F8	434 aa		11.8	□□□□□ -0.52

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