RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GTF2H3Q13889 308 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 RPE65Q16518 533 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 TMEM220Q6QAJ8 160 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 FAM92BQ6ZTR7 304 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 CCDC170Q8IYT3 715 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 CXorf40BQ96DE9 158 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 ANP32EQ9BTT0 268 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 ZNF768Q9H5H4 540 aaKnown RBP23.28■■□□□ 1.32
RAB40C-209ENST00000565511 ZNF891A8MT65 544 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-209ENST00000565511 PJA2O43164 708 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 FECHP22830 423 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 MAP4P27816 1152 aaKnown RBP23.27■■□□□ 1.32
RAB40C-209ENST00000565511 PSMB4P28070 264 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 STAT5AP42229 794 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 POLE2P56282 527 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 MSLNQ13421 630 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-209ENST00000565511 XRCC4Q13426 336 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 DUS1LQ6P1R4 473 aaKnown RBP23.27■■□□□ 1.32
RAB40C-209ENST00000565511 BORAQ6PGQ7 559 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 DET1Q7L5Y6 550 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 PRSS42Q7Z5A4 293 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 ALG3Q92685 438 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 ELMO2Q96JJ3 720 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 ZPBPQ9BS86 351 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 FSD1LQ9BXM9 530 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 FAM117AQ9C073 453 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 SMOXQ9NWM0 555 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 FKBPLQ9UIM3 349 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 TRHDEQ9UKU6 1024 aa23.27■■□□□ 1.32
RAB40C-209ENST00000565511 CFAP20Q9Y6A4 193 aaKnown RBP23.27■■□□□ 1.32
RAB40C-209ENST00000565511 TERTO14746 1132 aaKnown RBP23.26■■□□□ 1.31
RAB40C-209ENST00000565511 SGTAO43765 313 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 ABHD18Q0P651 414 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 CDC20Q12834 499 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 LDLRAP1Q5SW96 308 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 IRGCQ6NXR0 463 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 RAD9BQ6WBX8 426 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 CERS6Q6ZMG9 384 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 AMZ2Q86W34 360 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 BRSK1Q8TDC3 778 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 OR6C1Q96RD1 312 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 LACRTQ9GZZ8 138 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 PCDHA3Q9Y5H8 950 aa23.26■■□□□ 1.31
RAB40C-209ENST00000565511 HEMK1Q9Y5R4 338 aaPredicted RBP23.26■■□□□ 1.31
RAB40C-209ENST00000565511 MACROD2A1Z1Q3 448 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 SUV39H1O43463 412 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 RASSF9O75901 435 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 NDUFA10O95299 355 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 TIAF1O95411 115 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 PRAMEF1O95521 474 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 CYLC1P35663 651 aaPredicted RBP23.25■■□□□ 1.31
RAB40C-209ENST00000565511 ZNF75DP51815 510 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 GEMP55040 296 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 XIAPP98170 497 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 SPA17Q15506 151 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 FNBP1LQ5T0N5 605 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 CACHD1Q5VU97 1274 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 ZDHHC20Q5W0Z9 365 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 RANBP10Q6VN20 620 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 LILRA3Q8N6C8 439 aaPredicted RBP23.25■■□□□ 1.31
RAB40C-209ENST00000565511 GALNT6Q8NCL4 622 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 ACRBPQ8NEB7 543 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 OR4K2Q8NGD2 314 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 KLHL6Q8WZ60 621 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 TTC25Q96NG3 672 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 OSBPL8Q9BZF1 889 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 ULBP3Q9BZM4 244 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 PKP3Q9Y446 797 aa23.25■■□□□ 1.31
RAB40C-209ENST00000565511 EPN1Q9Y6I3 576 aaPredicted RBP23.25■■□□□ 1.31
RAB40C-209ENST00000565511 UBR5O95071 2799 aaPredicted RBP23.25■■□□□ 1.31
RAB40C-209ENST00000565511 IGHV5-51A0A0C4DH38 117 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 CCL22O00626 93 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 STX7O15400 261 aaKnown RBP23.24■■□□□ 1.31
RAB40C-209ENST00000565511 PPFIA2O75334 1257 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 VCLP18206 1134 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 CTNNA2P26232 953 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 PTPN7P35236 360 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 KCNAB2Q13303 367 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 KCNAB1Q14722 419 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 ANKRD20A2Q5SQ80 823 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 ANKRD20A1Q5TYW2 823 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 ANKRD20A3Q5VUR7 823 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 DENND5AQ6IQ26 1287 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 SPDYE1Q8NFV5 336 aaPredicted RBP23.24■■□□□ 1.31
RAB40C-209ENST00000565511 OR13C4Q8NGS5 318 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 CCDC110Q8TBZ0 833 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 ZNF398Q8TD17 642 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 STARD8Q92502 1023 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 INSM2Q96T92 566 aaPredicted RBP23.24■■□□□ 1.31
RAB40C-209ENST00000565511 ZCCHC2Q9C0B9 1178 aaKnown RBP23.24■■□□□ 1.31
RAB40C-209ENST00000565511 SLC25A18Q9H1K4 315 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 FAM8A1Q9UBU6 413 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 EPHA6Q9UF33 1036 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.24■■□□□ 1.31
RAB40C-209ENST00000565511 RPS6KL1Q9Y6S9 549 aa23.24■■□□□ 1.31
RAB40C-209ENST00000565511 A0A0U1RQJ8 604 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 TOX3O15405 576 aaPredicted RBP23.23■■□□□ 1.31
RAB40C-209ENST00000565511 KIAA0754O94854 1291 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 WISP1O95388 367 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 AKT1P31749 480 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms