RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 LCP2Q13094 533 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SYT16Q17RD7 645 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TAPT1Q6NXT6 567 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 KIAA0408Q6ZU52 694 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 BHLHA9Q7RTU4 235 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GALNT10Q86SR1 603 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 STON2Q8WXE9 905 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 HMCESQ96FZ2 354 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DACH2Q96NX9 599 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GAD1Q99259 594 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 BARD1Q99728 777 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PRKD2Q9BZL6 878 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 AGO3Q9H9G7 860 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PALMDQ9NP74 551 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 VAPAQ9P0L0 249 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ANXA6P08133 673 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CDH1P12830 882 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RAPSNQ13702 412 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PTGR1Q14914 329 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DPP9Q86TI2 863 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RIMKLAQ8IXN7 391 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PNPT1Q8TCS8 783 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RORBQ92753 470 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 FAM162AQ96A26 154 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MYLPFQ96A32 169 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MAGED4Q96JG8 741 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RIBC2Q9H4K1 309 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 AIG1Q9NVV5 245 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DERAQ9Y315 318 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 POLR2AP24928 1970 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 LOC100130705A0A1B0GUX0 176 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PTGESO14684 152 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GPR39O43194 453 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GPR32O75388 356 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PRSS23O95084 383 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SEC24AO95486 1093 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GSNP06396 782 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 WARSP23381 471 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GTF2E2P29084 291 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GALNT1Q10472 559 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 C6orf136Q5SQH8 315 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 IL27RAQ6UWB1 636 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DET1Q7L5Y6 550 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SLC22A15Q8IZD6 547 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 AMBNQ9NP70 447 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 AKIP1Q9NQ31 210 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 VPS4AQ9UN37 437 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CAB39Q9Y376 341 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 POLR3HQ9Y535 204 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ZNF99A8MXY4 864 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PFDN6O15212 129 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CACNG3O60359 315 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MATN4O95460 622 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ADAM17P78536 824 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 KDELC1Q6UW63 502 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GCNT7Q6ZNI0 430 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 HID1Q8IV36 788 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TSGA13Q96PP4 275 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ATOH8Q96SQ7 321 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ZFP14Q9HCL3 533 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TMLHEQ9NVH6 421 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TMED5Q9Y3A6 229 aa20.25■□□□□ 0.83
MAP1LC3B-206ENST00000564844 FFAR3O14843 346 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GPR42O15529 346 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RAP2AP10114 183 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 JUNBP17275 347 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 VAC14Q08AM6 782 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GTF2H3Q13889 308 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 NR6A1Q15406 480 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 COLEC12Q5KU26 742 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PTRH1Q86Y79 214 aaKnown RBP20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 EXOC2Q96KP1 924 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GPR21Q99679 349 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 C6orf62Q9GZU0 229 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SCHIP1Q9P0W5 487 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DOCK1Q14185 1865 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 IQCF5A8MTL0 148 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MYO1GB0I1T2 1018 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 UGT2B4P06133 528 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 FGF4P08620 206 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TGM1P22735 817 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PNPLA4P41247 253 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MARC1Q5VT66 337 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TTC23Q5W5X9 447 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 POC5Q8NA72 575 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 OR6J1Q8NGC5 347 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 NEU3Q9UQ49 428 aa20.24■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GOLGA8CPA6NN73 597 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 EEDO75530 441 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 B3GALT4O96024 378 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 UMPSP11172 480 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DARSP14868 501 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DNAJB1P25685 340 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DNAJB2P25686 324 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SERPINB1P30740 379 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 EMX2Q04743 252 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PRKG2Q13237 762 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 YTHDF1Q9BYJ9 559 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms