RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 CEP41Q9BYV8 373 aa13.93□□□□□ -0.18
COMMD4-211ENST00000564815 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
COMMD4-211ENST00000564815 ACSS2Q9NR19 701 aa13.93□□□□□ -0.18
COMMD4-211ENST00000564815 DDX56Q9NY93 547 aaKnown RBP13.93□□□□□ -0.18
COMMD4-211ENST00000564815 SEMA5BQ9P283 1151 aa13.93□□□□□ -0.18
COMMD4-211ENST00000564815 FAM153AQ9UHL3 310 aa13.93□□□□□ -0.18
COMMD4-211ENST00000564815 FARSAQ9Y285 508 aaKnown RBP13.93□□□□□ -0.18
COMMD4-211ENST00000564815 COL12A1Q99715 3063 aa13.93□□□□□ -0.18
COMMD4-211ENST00000564815 BLACEA4D250 179 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 KLHL33A6NCF5 533 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 AGFG2O95081 481 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 FURINP09958 794 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 NR1D1P20393 614 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 VARSP26640 1264 aaKnown RBP13.92□□□□□ -0.18
COMMD4-211ENST00000564815 PBX1P40424 430 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 HSD11B2P80365 405 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 DMPKQ09013 629 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 XRCC4Q13426 336 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 ITGA9Q13797 1035 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 RPE65Q16518 533 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 SLC18A3Q16572 532 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 UGT8Q16880 541 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 LONRF2Q1L5Z9 754 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 DNTTIP2Q5QJE6 756 aaKnown RBP13.92□□□□□ -0.18
COMMD4-211ENST00000564815 PWWP2BQ6NUJ5 590 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 CAVIN1Q6NZI2 390 aaKnown RBP13.92□□□□□ -0.18
COMMD4-211ENST00000564815 TMEM220Q6QAJ8 160 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 GALNT11Q8NCW6 608 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 TADA1Q96BN2 335 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 RNF31Q96EP0 1072 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 TEKT5Q96M29 485 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 FGF21Q9NSA1 209 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 KCND1Q9NSA2 647 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 HRASLS2Q9NWW9 162 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 PKP3Q9Y446 797 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 COLEC10Q9Y6Z7 277 aa13.92□□□□□ -0.18
COMMD4-211ENST00000564815 RP1L1Q8IWN7 2480 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-211ENST00000564815 IGHV5-51A0A0C4DH38 117 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 TLCD2A6NGC4 264 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 AKR1B10O60218 316 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 CPNE3O75131 537 aaKnown RBP13.91□□□□□ -0.18
COMMD4-211ENST00000564815 MT-CYBP00156 380 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-211ENST00000564815 TMEM253P0C7T8 217 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 PYGMP11217 842 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 FOLR1P15328 257 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 MSH3P20585 1137 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 SPAM1P38567 509 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 CCL11P51671 97 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 TUBB4BP68371 445 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 TUBB2AQ13885 445 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 TFDP2Q14188 446 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 KRT33BQ14525 404 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 LRRC38Q5VT99 294 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 OOSP2Q86WS3 158 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 TMEM126BQ8IUX1 230 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 CARFQ8N187 725 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 SPATA22Q8NHS9 363 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 SLC35G2Q8TBE7 412 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 CPT1CQ8TCG5 803 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 TFB1MQ8WVM0 346 aaKnown RBP13.91□□□□□ -0.18
COMMD4-211ENST00000564815 MR1Q95460 341 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 MAP3K3Q99759 626 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 TUBB2BQ9BVA1 445 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 IL26Q9NPH9 171 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 ACSL5Q9ULC5 683 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 WDR37Q9Y2I8 494 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 PCDHGB7Q9Y5F8 929 aa13.91□□□□□ -0.18
COMMD4-211ENST00000564815 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
COMMD4-211ENST00000564815 GLYATL1P3A0A0U1RQE8 302 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 LOC285095A0A1B0GVY8 99 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 K7EM74 188 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 AURKAO14965 403 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 SCRG1O75711 98 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 ZBTB11O95625 1053 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-211ENST00000564815 KRT1P04264 644 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 TPM1P09493 284 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 HNRNPH3P31942 346 aaKnown RBP13.9□□□□□ -0.18
COMMD4-211ENST00000564815 SLC1A1P43005 524 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 WNT3AP56704 352 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 GSDMDP57764 484 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 PRKAA1Q13131 559 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 GSE1Q14687 1217 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 CHRNA6Q15825 494 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 KHDC1Q4VXA5 237 aaKnown RBP13.9□□□□□ -0.18
COMMD4-211ENST00000564815 METRNLQ641Q3 311 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 C11orf96Q7Z7L8 435 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 TMEM135Q86UB9 458 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 HPS6Q86YV9 775 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 RHOT2Q8IXI1 618 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 RHOT1Q8IXI2 618 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 D2HGDHQ8N465 521 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 RASGEF1AQ8N9B8 481 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 OR8K1Q8NGG5 319 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 RNF25Q96BH1 459 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-211ENST00000564815 OLFM3Q96PB7 478 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 VAT1Q99536 393 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 FANCEQ9HB96 536 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 SYTL2Q9HCH5 934 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 IMP3Q9NV31 184 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms