RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 MAP9Q49MG5 647 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 EMBQ6PCB8 327 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 GATAD2AQ86YP4 633 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 BEND7Q8N7W2 519 aaPredicted RBP18.52■□□□□ 0.56
RAB40C-207ENST00000563109 HM13Q8TCT9 377 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 GPBAR1Q8TDU6 330 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 NAT14Q8WUY8 206 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 FAM122AQ96E09 287 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 LINC00615Q96LM1 132 aaPredicted RBP18.52■□□□□ 0.56
RAB40C-207ENST00000563109 PANX3Q96QZ0 392 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 CCM2Q9BSQ5 444 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 P2RY12Q9H244 342 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 OSGEPL1Q9H4B0 414 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 RXFP3Q9NSD7 469 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 KLC4Q9NSK0 619 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 UCKL1Q9NWZ5 548 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 SLC17A6Q9P2U8 582 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 KCNK6Q9Y257 313 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 COMMD10Q9Y6G5 202 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 PRSS21Q9Y6M0 314 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 VPS13AQ96RL7 3174 aa18.52■□□□□ 0.55
RAB40C-207ENST00000563109 DMDP11532 3685 aa18.52■□□□□ 0.55
RAB40C-207ENST00000563109 PIKFYVEQ9Y2I7 2098 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 A0A087WUV0 522 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-207ENST00000563109 MGAT4DA6NG13 374 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 LMO7DNF2Z398 122 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 FFAR2O15552 330 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 SGTAO43765 313 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 ABHD2P08910 425 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 PKMP14618 531 aaKnown RBP18.51■□□□□ 0.55
RAB40C-207ENST00000563109 KBTBD12Q3ZCT8 623 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 SYTL3Q4VX76 610 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 ZNF789Q5FWF6 425 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 SLC30A9Q6PML9 568 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 STRA8Q7Z7C7 330 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 CCL4L1Q8NHW4 92 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 CYTH2Q99418 400 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 DUSP23Q9BVJ7 150 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 TXLNGYQ9BZA5 131 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 CAAP1Q9H8G2 361 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 RAB21Q9UL25 225 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 CORO1CQ9ULV4 474 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-207ENST00000563109 DNAJC16Q9Y2G8 782 aa18.51■□□□□ 0.55
RAB40C-207ENST00000563109 C4orf47A7E2U8 309 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 E5RI56 91 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 FLRT2O43155 660 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 HAUS5O94927 633 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 CELA2BP08218 269 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-207ENST00000563109 F7P08709 466 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-207ENST00000563109 AK4P27144 223 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-207ENST00000563109 CLCNKAP51800 687 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 ARHGAP8P85298 464 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 DMPKQ09013 629 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 NAA30Q147X3 362 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-207ENST00000563109 TMED2Q15363 201 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 KLHL38Q2WGJ6 581 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 DEFB133Q30KQ1 61 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 CTSL3PQ5NE16 218 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 STPG1Q5TH74 334 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 CNSTQ6PJW8 725 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 LVRNQ6Q4G3 990 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 KANSL1Q7Z3B3 1105 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 C11orf96Q7Z7L8 435 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 KIAA2013Q8IYS2 634 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 PPM1NQ8N819 430 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 OR2L2Q8NH16 312 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 UBLCP1Q8WVY7 318 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-207ENST00000563109 ELMO1Q92556 727 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 CPNE1Q99829 537 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 ACSS3Q9H6R3 686 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 SMYD2Q9NRG4 433 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 NLGN3Q9NZ94 848 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 TAAR2Q9P1P5 351 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 FAM8A1Q9UBU6 413 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 SLC23A2Q9UGH3 650 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 PLEKHM1Q9Y4G2 1056 aa18.5■□□□□ 0.55
RAB40C-207ENST00000563109 C17orf113A0A1B0GUU1 675 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.49■□□□□ 0.55
RAB40C-207ENST00000563109 CXorf49A8MYA2 514 aaPredicted RBP18.49■□□□□ 0.55
RAB40C-207ENST00000563109 TPP1O14773 563 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 RIPK2O43353 540 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 GDF9O60383 454 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 TRIM16O95361 564 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 AHSGP02765 367 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 ITGB6P18564 788 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 IDSP22304 550 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 GRK6P43250 576 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 CSE1LP55060 971 aaKnown RBP18.49■□□□□ 0.55
RAB40C-207ENST00000563109 NRROSQ86YC3 692 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 SLC25A45Q8N413 288 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 FAM46DQ8NEK8 389 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 AENQ8WTP8 325 aaKnown RBP18.49■□□□□ 0.55
RAB40C-207ENST00000563109 BIRC8Q96P09 236 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 FUT8Q9BYC5 575 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 RABGEF1Q9UJ41 708 aa18.49■□□□□ 0.55
RAB40C-207ENST00000563109 PDZK1P1A8MUH7 402 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 B4DGG1 531 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 LIN7AO14910 233 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-207ENST00000563109 KPNA5O15131 536 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 YY2O15391 372 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms