RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 TAF8Q7Z7C8 310 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 SFRP1Q8N474 314 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 SYT2Q8N9I0 419 aaPredicted RBP6.12□□□□□ -1.43
USP8-210ENST00000560379 ARRDC3Q96B67 414 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 GLT1D1Q96MS3 346 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 HAPLN3Q96S86 360 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 CD180Q99467 661 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 PRRX2Q99811 253 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 MXRA8Q9BRK3 442 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 SLC5A7Q9GZV3 580 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 FOXP1Q9H334 677 aaPredicted RBP6.12□□□□□ -1.43
USP8-210ENST00000560379 WDR26Q9H7D7 661 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 SYNPO2LQ9H987 977 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 HPS4Q9NQG7 708 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.12□□□□□ -1.43
USP8-210ENST00000560379 PDGFCQ9NRA1 345 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 SMPD4Q9NXE4 827 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 IL20Q9NYY1 176 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 TBC1D7Q9P0N9 293 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 TUBE1Q9UJT0 475 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 CHKBQ9Y259 395 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 DRG1Q9Y295 367 aaKnown RBP6.12□□□□□ -1.43
USP8-210ENST00000560379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.12□□□□□ -1.43
USP8-210ENST00000560379 SNX9Q9Y5X1 595 aa6.12□□□□□ -1.43
USP8-210ENST00000560379 MYH9P35579 1960 aaKnown RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 IGLV3-22A0A075B6J6 115 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 CYP3A7-CYP3A51PA0A087WV96 503 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 EME2A4GXA9 379 aaPredicted RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 MYADML2A6NDP7 307 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 MBD3L5A6NJ08 208 aaPredicted RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 OR6C76A6NM76 312 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 PRR5-ARHGAP8B1AHC4 643 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 FAM86B1E9PN63 330 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 SYN3O14994 580 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 RECQL5O94762 991 aaPredicted RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 WDR47O94967 919 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 DLATP10515 647 aaKnown RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 PCNAP12004 261 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 SELLP14151 372 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ITGALP20701 1170 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 GCSHP23434 173 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 CYP3A7P24462 503 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 RPL13P26373 211 aaKnown RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 EPHA3P29320 983 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 NR2C2P49116 596 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 RPL7AP62424 266 aaKnown RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 GPM6BQ13491 265 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 NFYCQ13952 458 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 DOC2AQ14183 400 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 GALNT3Q14435 633 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 Q4G0T1 1027 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ANKRD20A4Q4UJ75 823 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ANKRD20A8PQ5CZ79 823 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ANKRD20A2Q5SQ80 823 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 UBAP2Q5T6F2 1119 aaKnown RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 ANKRD20A1Q5TYW2 823 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ANKRD20A3Q5VUR7 823 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ETFRF1Q6IPR1 90 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 CCDC144NLQ6NUI1 221 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 CLEC2AQ6UVW9 174 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 DGLUCYQ7Z3D6 616 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ANKRD33Q7Z3H0 272 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 NEK8Q86SG6 692 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ZNF761Q86XN6 746 aaPredicted RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 RFX6Q8HWS3 928 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 CCDC65Q8IXS2 484 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 SIX6OS1Q8N1H7 587 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 POC5Q8NA72 575 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 OR52M1Q8NGK5 317 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 TBCKQ8TEA7 893 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 DUSP19Q8WTR2 217 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 METTL21AQ8WXB1 218 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 CORO2AQ92828 525 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 LENG9Q96B70 501 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 DHX58Q96C10 678 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 SAAL1Q96ER3 474 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 ATP6V1G3Q96LB4 118 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 MBOAT7Q96N66 472 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 KCNK16Q96T55 309 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 SH3GL1Q99961 368 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 LBHD1Q9BQE6 289 aaPredicted RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 MTG1Q9BT17 334 aaPredicted RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 HEMGNQ9BXL5 484 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 CLPBQ9H078 707 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 TMEM168Q9H0V1 697 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 XKR8Q9H6D3 395 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 NRDE2Q9H7Z3 1164 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 SCPEP1Q9HB40 452 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 SOHLH2Q9NX45 425 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 HCN3Q9P1Z3 774 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 STK39Q9UEW8 545 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 SORCS3Q9UPU3 1222 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 NR2E1Q9Y466 385 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 DDX49Q9Y6V7 483 aaKnown RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 RANBP2P49792 3224 aaKnown RBP6.11□□□□□ -1.43
USP8-210ENST00000560379 ARID2Q68CP9 1835 aa6.11□□□□□ -1.43
USP8-210ENST00000560379 TBC1D3DA0A087WVF3 549 aa6.1□□□□□ -1.43
USP8-210ENST00000560379 TBC1D3IA0A087WXS9 549 aa6.1□□□□□ -1.43
USP8-210ENST00000560379 TBC1D3EA0A087X179 549 aa6.1□□□□□ -1.43
USP8-210ENST00000560379 TBC1D3KA0A087X1G2 549 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms