RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PSMD4P55036 377 aaKnown RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 GRASPQ7Z6J2 395 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TMEM192Q8IY95 271 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 NARS2Q96I59 477 aaKnown RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 GAL3ST4Q96RP7 486 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 HOPXQ9BPY8 73 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TXNRD2Q9NNW7 524 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 PNPOQ9NVS9 261 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 FBXL12Q9NXK8 326 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 NUDT4Q9NZJ9 180 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 FAM155BO75949 473 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 CHIT1Q13231 466 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TTMPQ5BVD1 217 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 FAM91A1Q658Y4 838 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 PRSS58Q8IYP2 241 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 ERVK-11Q9UQG0 969 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 YIPF1Q9Y548 306 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 NEMP2A6NFY4 417 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 NMBRP28336 390 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 IL12BP29460 328 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 FSTL1Q12841 308 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 MAPK11Q15759 364 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 MBLAC2Q68D91 279 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 ZNF540Q8NDQ6 660 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 PTPN18Q99952 460 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 GKN1Q9NS71 199 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 G3V2T6 193 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 GIMD1P0DJR0 217 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 ACTR3P61158 418 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 SEMG2Q02383 582 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TAB1Q15750 504 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TSTD2Q5T7W7 516 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 CLEC20AQ6ZU45 233 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 CPNE9Q8IYJ1 553 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TBC1D10AQ9BXI6 508 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 MYH7BA7E2Y1 1941 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 A0A1W2PQ45 241 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 A0A1W2PQY0 241 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TMCC2O75069 709 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TGDSO95455 350 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 ADSSP30520 456 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 NRIP1P48552 1158 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 RGS8P57771 180 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 PTGES3Q15185 160 aaKnown RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 FBXW8Q8N3Y1 598 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 OR2T12Q8NG77 320 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 CLEC4CQ8WTT0 213 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 SLC22A18Q96BI1 424 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 NUS1Q96E22 293 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 KCND1Q9NSA2 647 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TDP1Q9NUW8 608 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 SH3GLB1Q9Y371 365 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 PCDHB11Q9Y5F2 797 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 S100GP29377 79 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 ACTR1BP42025 376 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 JAM2P57087 298 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 ACTR1AP61163 376 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 BEND5Q7L4P6 421 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 DHDDSQ86SQ9 333 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 OAFQ86UD1 273 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 SLC47A1Q96FL8 570 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 TRAPPC9Q96Q05 1148 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 PCDHGA11Q9Y5H2 935 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 MTRF1O75570 445 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 UROSP10746 265 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 PNLIPRP1P54315 467 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 RAPSNQ13702 412 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CARD16Q5EG05 197 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 TXNDC8Q6A555 127 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CPSF7Q8N684 471 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 TWIST2Q8WVJ9 160 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 KCTD13Q8WZ19 329 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 NPAS2Q99743 824 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 PAIP1Q9H074 479 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 WDR26Q9H7D7 661 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CARS2Q9HA77 564 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 FKBPLQ9UIM3 349 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 MAP4K5Q9Y4K4 846 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 SASH3O75995 380 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 UNC5CO95185 931 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CHRNGP07510 517 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CTSOP43234 321 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 ATXN1P54253 815 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 FBXO48Q5FWF7 155 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 DPYSL5Q9BPU6 564 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 MRPS30Q9NP92 439 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 U3KQV3 271 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 ASPAP45381 313 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 VPS26BQ4G0F5 336 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 EOGTQ5NDL2 527 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 MZT2AQ6P582 158 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 ABRAXAS1Q6UWZ7 409 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 PTCHD4Q6ZW05 846 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 RASGEF1CQ8N431 466 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 ADCY4Q8NFM4 1077 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 VANGL1Q8TAA9 524 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 GMEB2Q9UKD1 530 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 PRPF19Q9UMS4 504 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms