RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 TARBP2Q15633 366 aaKnown RBP16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 PARP15Q460N3 678 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 B3GNT8Q7Z7M8 397 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 CCDC190Q86UF4 302 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 CELF2-AS1Q8N7Q2 184 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 RPL3LQ92901 407 aaKnown RBP16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 ZFYVE19Q96K21 471 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 C3orf30Q96M34 536 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 SIGLEC11Q96RL6 698 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 SLC9A7Q96T83 725 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 MLPHQ9BV36 600 aaPredicted RBP16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 C6orf62Q9GZU0 229 aaPredicted RBP16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 CDHR5Q9HBB8 845 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 C3orf14Q9HBI5 128 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 PTPRHQ9HD43 1115 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 B3GNT2Q9NY97 397 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 TNFRSF10DQ9UBN6 386 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 FBXO9Q9UK97 447 aaPredicted RBP16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 BTRCQ9Y297 605 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 TLR6Q9Y2C9 796 aa16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 ARIH1Q9Y4X5 557 aaPredicted RBP16.02■□□□□ 0.15
HMBOX1-212ENST00000558662 H3BMM5 538 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 UBFD1O14562 309 aaKnown RBP16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 CACNG3O60359 315 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 SLC22A3O75751 556 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 SEMA3DO95025 777 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 EGFRP00533 1210 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 F9P00740 461 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 CYBBP04839 570 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 RPLP0P05388 317 aaKnown RBP16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 HGFP14210 728 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 MSH3P20585 1137 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 LSM3P62310 102 aaKnown RBP16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 PIGFQ07326 219 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 SLC25A52Q3SY17 297 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 TBRG1Q3YBR2 411 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 UNC50Q53HI1 259 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 FAM182AQ5T1J6 154 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 ARHGAP17Q68EM7 881 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 FAM122CQ6P4D5 195 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 OTOP3Q7RTS5 596 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 SYTL1Q8IYJ3 562 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 TUBGCP3Q96CW5 907 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 TOR4AQ9NXH8 423 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 IL20Q9NYY1 176 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 RABL2AQ9UBK7 228 aaPredicted RBP16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 KLHL21Q9UJP4 597 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 GPSM3Q9Y4H4 160 aa16.01■□□□□ 0.15
HMBOX1-212ENST00000558662 ATP6AP2A0A1C7CYW4 349 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 A0A1W2PQ72 361 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 CD3EAPO15446 510 aaKnown RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 NOS1APO75052 506 aaPredicted RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 MAFO75444 373 aaPredicted RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 ZBTB7AO95365 584 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 MT-ND2P03891 347 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 ALDH4A1P30038 563 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 HTR2BP41595 481 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 MATKP42679 507 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 IL12RB1P42701 662 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 MASP1P48740 699 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 POLR2JP52435 117 aaKnown RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 IKZF1Q13422 519 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 TNK1Q13470 666 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 TRIP4Q15650 581 aaPredicted RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 SMAD1Q15797 465 aaKnown RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 TBCEQ15813 527 aaPredicted RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 CLEC6AQ6EIG7 209 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 FAM196AQ6ZSG2 479 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 TSPYL5Q86VY4 417 aaPredicted RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 GATAD2AQ86YP4 633 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 RAVER1Q8IY67 606 aaKnown RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 NSUN6Q8TEA1 469 aaKnown RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 SLC7A6Q92536 515 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 ZNF556Q9HAH1 456 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 SMURF2Q9HAU4 748 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 CYP4F12Q9HCS2 524 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 USP22Q9UPT9 525 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 ZNF646O15015 1829 aaPredicted RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 A0A0G2JMZ2 1700 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 LRRC37A2A6NM11 1700 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 MGAMO43451 1857 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 NEMP2A6NFY4 417 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 PIP5K1BO14986 540 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 HS6ST1O60243 411 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 TSPAN1O60635 241 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 ATP6AP2O75787 350 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 RETP07949 1114 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 CES1P23141 567 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 PIK3CBP42338 1070 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 TUFMP49411 452 aaKnown RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 OR4D2P58180 307 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 OLR1P78380 273 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 LRRC26Q2I0M4 334 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 PROX2Q3B8N5 592 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 GPAT3Q53EU6 434 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 NOL9Q5SY16 702 aaKnown RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
HMBOX1-212ENST00000558662 MFSD6LQ8IWD5 586 aa16■□□□□ 0.15
HMBOX1-212ENST00000558662 DTWD1Q8N5C7 304 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms