RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 JAZF1Q86VZ6 243 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 ANKRD46Q86W74 232 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 ESAMQ96AP7 390 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 HSPBAP1Q96EW2 488 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 RNF157Q96PX1 679 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 GAS2L1Q99501 681 aaPredicted RBP13.83□□□□□ -0.19
SPG11-210ENST00000558319 AIFM2Q9BRQ8 373 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 CDT1Q9H211 546 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 LRRC4CQ9HCJ2 640 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 NPR2P20594 1047 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 LIPEQ05469 1076 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 KLHDC10Q6PID8 442 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 CATSPERGQ6ZRH7 1159 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 ZNF248Q8NDW4 579 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 AUTS2Q8WXX7 1259 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 MAGEE1Q9HCI5 957 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 IFT46Q9NQC8 304 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 REXO2Q9Y3B8 237 aaKnown RBP13.83□□□□□ -0.2
SPG11-210ENST00000558319 TEX46H3BTG2 121 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 CHST10O43529 356 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 HCN1O60741 890 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 FKTNO75072 461 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 IFNGP01579 166 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 CORO1AP31146 461 aaKnown RBP13.83□□□□□ -0.2
SPG11-210ENST00000558319 NTRK3Q16288 839 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 C4orf46Q504U0 113 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 SLC30A6Q6NXT4 461 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 XAGE5Q8WWM1 108 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 ZNF570Q96NI8 536 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 DPEP3Q9H4B8 488 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 PLK4O00444 970 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 GABBR2O75899 941 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.2
SPG11-210ENST00000558319 SSR2P43308 183 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 DACT2Q5SW24 774 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 EEF1DP3Q658K8 133 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 CHST9Q7L1S5 443 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 CHST15Q7LFX5 561 aaPredicted RBP13.83□□□□□ -0.2
SPG11-210ENST00000558319 CPSF7Q8N684 471 aaKnown RBP13.83□□□□□ -0.2
SPG11-210ENST00000558319 ZMIZ2Q8NF64 920 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 OR4L1Q8NH43 312 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 JOSD2Q8TAC2 188 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 OR8D1Q8WZ84 308 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 PIK3R3Q92569 461 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 EFCAB9A8MZ26 197 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 LHCGRP22888 699 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 TMEM119Q4V9L6 283 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 PYHIN1Q6K0P9 492 aa13.83□□□□□ -0.2
SPG11-210ENST00000558319 OXCT2Q9BYC2 517 aaPredicted RBP13.83□□□□□ -0.2
SPG11-210ENST00000558319 COL5A2P05997 1499 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 SRRM3A6NNA2 597 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 ZNF12P17014 697 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 PRKCHP24723 683 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 PABPC1LQ4VXU2 614 aaKnown RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 TBX5Q99593 518 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 ACSS3Q9H6R3 686 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TESMINQ9Y4I5 508 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 ZFP37Q9Y6Q3 630 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 NRCAMQ92823 1304 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 SHOX2O60902 331 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 CD40LGP29965 261 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 SNX33Q8WV41 574 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 FCRL2Q96LA5 508 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 YIPF4Q9BSR8 244 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TNS2Q63HR2 1409 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 ADH1AP07327 375 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 GNAO1P09471 354 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TUBA4AP68366 448 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TAF10Q12962 218 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 CRTC2Q53ET0 693 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 TMEM214Q6NUQ4 689 aaKnown RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 ACMSDQ8TDX5 336 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 PDE10AQ9Y233 779 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 MEGF6O75095 1541 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 H3BNX3 289 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 CACNB4O00305 520 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 GLUD1P00367 558 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TGFB3P10600 412 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TTPAP49638 278 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 LACTB2Q53H82 288 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 USP30Q70CQ3 517 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 MCEMP1Q8IX19 187 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 RDH11Q8TC12 318 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 SLC28A3Q9HAS3 691 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 ZNF69Q9UC07 566 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 PLLPQ9Y342 182 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 SQORQ9Y6N5 450 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 hCG_1818297A0A087WSY0 165 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 UGT1A9O60656 530 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 PPM1BO75688 479 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TRBC1P01850 177 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 UGT1A6P19224 532 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 UGT1A1P22309 533 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 UGT1A4P22310 534 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 FSHRP23945 695 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 UGT1A3P35503 534 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 IL17AQ16552 155 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 CRY2Q49AN0 593 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 ANXA8L1Q5VT79 327 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TAPT1Q6NXT6 567 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms