RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GRK4P32298 578 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 IDUAP35475 653 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 MRPS6P82932 125 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 CHRNB3Q05901 458 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 PTPRRQ15256 657 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 CCL14Q16627 93 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 PTPRNQ16849 979 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 CTU2Q2VPK5 515 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 SPATS1Q496A3 300 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 ATP6AP1LQ52LC2 224 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 FAM98BQ52LJ0 330 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 ZFAND4Q86XD8 727 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 ZDHHC13Q8IUH4 622 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 ABI1Q8IZP0 508 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 C8orf59Q8N0T1 100 aaPredicted RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 ABHD11Q8NFV4 315 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 OR4K2Q8NGD2 314 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 RAB2BQ8WUD1 216 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 RSPH1Q8WYR4 309 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TADA1Q96BN2 335 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 NRBF2Q96F24 287 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 SLC39A13Q96H72 371 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 EXOC2Q96KP1 924 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 RPRD1AQ96P16 312 aaPredicted RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 C17orf80Q9BSJ5 609 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 FUNDC2Q9BWH2 189 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 AMBRA1Q9C0C7 1298 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 POLR1EQ9GZS1 481 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 RAD21L1Q9H4I0 556 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 FAM118AQ9NWS6 357 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TLR6Q9Y2C9 796 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 PCDHB3Q9Y5E6 796 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 ST14Q9Y5Y6 855 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 SLC30A1Q9Y6M5 507 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 COL4A4P53420 1690 aaPredicted RBP11.25□□□□□ -0.61
SRP54-213ENST00000556994 LCHNA4D1U4 455 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 BCAS1O75363 584 aaPredicted RBP11.25□□□□□ -0.61
SRP54-213ENST00000556994 SOAT2O75908 522 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CST1P01037 141 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 ANXA6P08133 673 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 RAP2AP10114 183 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 OR1E1P30953 314 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 RAD23AP54725 363 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 ERVPABLB-1P60509 514 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 ZNF235Q14590 738 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CRY1Q16526 586 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 DPY19L1Q2PZI1 675 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 PERM1Q5SV97 790 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 SULT1C3Q6IMI6 304 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 LETMD1Q6P1Q0 360 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CRTC3Q6UUV7 619 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 IL27RAQ6UWB1 636 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 GPRIN3Q6ZVF9 776 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 FAM126BQ8IXS8 530 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 THEM5Q8N1Q8 247 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CFAP52Q8N1V2 620 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 PARP8Q8N3A8 854 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 LEMD2Q8NC56 503 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 BRI3BPQ8WY22 251 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 RMDN1Q96DB5 314 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 ITCHQ96J02 903 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CCDC138Q96M89 665 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 NSMCE3Q96MG7 304 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CGREF1Q99674 301 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 TBCDQ9BTW9 1192 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CCDC90BQ9GZT6 254 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 ACTL8Q9H568 366 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 POPDC3Q9HBV1 291 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 HPS4Q9NQG7 708 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 MAGEL2Q9UJ55 1249 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 IQCF5A8MTL0 148 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 M0QZ92 97 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 GNGT2O14610 69 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 DFNA5O60443 496 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 COQ9O75208 318 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 INMTO95050 263 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CHRNA1P02708 482 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CYP11A1P05108 521 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 FGF1P05230 155 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CNPP09543 421 aaKnown RBP11.25□□□□□ -0.61
SRP54-213ENST00000556994 FSHRP23945 695 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 GSTM2P28161 218 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 HTR1BP28222 390 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 GGT5P36269 586 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 SERINC3Q13530 473 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 TYSND1Q2T9J0 566 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 C6orf141Q5SZD1 244 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
SRP54-213ENST00000556994 CHDHQ8NE62 594 aaPredicted RBP11.25□□□□□ -0.61
SRP54-213ENST00000556994 OR56A4Q8NGH8 313 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 OR10Q1Q8NGQ4 319 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 OR10A6Q8NH74 314 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 METTL6Q8TCB7 284 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 FKBP10Q96AY3 582 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 MS4A4AQ96JQ5 239 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 CNDP2Q96KP4 475 aaKnown RBP11.25□□□□□ -0.61
SRP54-213ENST00000556994 ZNF583Q96ND8 569 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 MBOAT4Q96T53 435 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms