RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 R3HCC1LQ7Z5L2 792 aaKnown RBP3.18□□□□□ -1.9
SNX6-204ENST00000555541 SMAP1Q8IYB5 467 aaPredicted RBP3.18□□□□□ -1.9
SNX6-204ENST00000555541 RNF168Q8IYW5 571 aaPredicted RBP3.18□□□□□ -1.9
SNX6-204ENST00000555541 GCSAMQ8N6F7 178 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 SGCDQ92629 289 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 PERPQ96FX8 193 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 PREBQ9HCU5 417 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 UBN1Q9NPG3 1134 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 SLC38A7Q9NVC3 462 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 MTMR10Q9NXD2 777 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 CROCCQ5TZA2 2017 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 A0A1W2PPH5 198 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 A6NL46 340 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 C15orf62A8K5M9 175 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 HCRTR2O43614 444 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 KRT19P08727 400 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 GNAZP19086 355 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 BSGP35613 385 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 RGS2P41220 211 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 SNAI3Q3KNW1 292 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 ADAMTSL4-AS1Q5T5F5 129 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 ZNF613Q6PF04 617 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 ZNF790Q6PG37 636 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 CYP20A1Q6UW02 462 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 TSPAN33Q86UF1 283 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 C1orf52Q8N6N3 182 aaKnown RBP3.17□□□□□ -1.9
SNX6-204ENST00000555541 PAF1Q8N7H5 531 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 PRMT6Q96LA8 375 aaPredicted RBP3.17□□□□□ -1.9
SNX6-204ENST00000555541 PSD2Q9BQI7 771 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 SYT11Q9BT88 431 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 RAD21L1Q9H4I0 556 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 POLR1BQ9H9Y6 1135 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 EPB41L5Q9HCM4 733 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 YIPF1Q9Y548 306 aa3.17□□□□□ -1.9
SNX6-204ENST00000555541 ARHGEF40Q8TER5 1519 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 MEIOCA2RUB1 952 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 PLPP2O43688 288 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 NDUFS3O75489 264 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 BMP10O95393 424 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 SPARCP09486 303 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 SELLP14151 372 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 HRH2P25021 359 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 MMP15P51511 669 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 CASP6P55212 293 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 MVPQ14764 893 aaKnown RBP3.16□□□□□ -1.9
SNX6-204ENST00000555541 METTL7BQ6UX53 244 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 MFSD6Q6ZSS7 791 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 CCDC190Q86UF4 302 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 PTOV1Q86YD1 416 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 OR8K5Q8NH50 307 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 FGFBP3Q8TAT2 258 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 TRPC4APQ8TEL6 797 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 SMPDL3BQ92485 455 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 WDFY2Q96P53 400 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 GFI1Q99684 422 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 JMJD4Q9H9V9 463 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 ZNF71Q9NQZ8 489 aaPredicted RBP3.16□□□□□ -1.9
SNX6-204ENST00000555541 DNAJB4Q9UDY4 337 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 B3GALT5Q9Y2C3 310 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 KLF2Q9Y5W3 355 aaPredicted RBP3.16□□□□□ -1.9
SNX6-204ENST00000555541 FLT1P17948 1338 aa3.16□□□□□ -1.9
SNX6-204ENST00000555541 TEX13DA0A0J9YY54 714 aaPredicted RBP3.15□□□□□ -1.91
SNX6-204ENST00000555541 A0A1B0GVC2 190 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 OR2M5A3KFT3 312 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 SMAD9O15198 467 aaKnown RBP3.15□□□□□ -1.91
SNX6-204ENST00000555541 ZNF217O75362 1048 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 LIFP15018 202 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 ACADLP28330 430 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 TFAP4Q01664 338 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 GOLGA8DPQ0D2H9 430 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 NIPAL4Q0D2K0 466 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 NAB2Q15742 525 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 TCTEX1D4Q5JR98 221 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 NDUFAF5Q5TEU4 345 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 BHLHB9Q6PI77 547 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 SH2D5Q6ZV89 423 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 ARHGAP12Q8IWW6 846 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 DIS3L2Q8IYB7 885 aaKnown RBP3.15□□□□□ -1.91
SNX6-204ENST00000555541 ETNPPLQ8TBG4 499 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 SIX2Q9NPC8 291 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 INTS10Q9NVR2 710 aaKnown RBP3.15□□□□□ -1.91
SNX6-204ENST00000555541 RCC2Q9P258 522 aaKnown RBP3.15□□□□□ -1.91
SNX6-204ENST00000555541 LIMA1Q9UHB6 759 aaKnown RBP3.15□□□□□ -1.91
SNX6-204ENST00000555541 KCNJ14Q9UNX9 436 aa3.15□□□□□ -1.91
SNX6-204ENST00000555541 R3HDM2Q9Y2K5 976 aaKnown RBP3.15□□□□□ -1.91
SNX6-204ENST00000555541 FAM237BA0A1B0GVD1 139 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 MAGEB17A8MXT2 336 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 H3BQ06 376 aaPredicted RBP3.14□□□□□ -1.91
SNX6-204ENST00000555541 CLPTM1O96005 669 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 CLEC3BP05452 202 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 TPOP07202 933 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 PLA2G4BP0C869 781 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 ITGA3P26006 1051 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 CD81P60033 236 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 CTU2Q2VPK5 515 aaKnown RBP3.14□□□□□ -1.91
SNX6-204ENST00000555541 GLDNQ6ZMI3 551 aaPredicted RBP3.14□□□□□ -1.91
SNX6-204ENST00000555541 P2RY8Q86VZ1 359 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 HACE1Q8IYU2 909 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 FRMD1Q8N878 549 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 OR2T12Q8NG77 320 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms