RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PRAG1Q86YV5 1406 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 PLK4O00444 970 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 TSPAN1O60635 241 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 CAMTA2O94983 1202 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 TRUB2O95900 331 aaKnown RBP5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 CCDC175P0C221 793 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 PFKFB1P16118 471 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 POLR2CP19387 275 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 CCKBRP32239 447 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 CDH13P55290 713 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 CD81P60033 236 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 PLIN5Q00G26 463 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 RAB6CQ53S08 254 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 ARMC4Q5T2S8 1044 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 ALS2CLQ60I27 953 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 PLEKHM3Q6ZWE6 761 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 Q75L30 129 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 TMEM173Q86WV6 379 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 OR6J1Q8NGC5 347 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 EXD1Q8NHP7 514 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 WDR20Q8TBZ3 569 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 TAS1R2Q8TE23 839 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 TMEM255BQ8WV15 326 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 TEKT4Q8WW24 435 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 NEUROG1Q92886 237 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 HDAC11Q96DB2 347 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 ERLEC1Q96DZ1 483 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 ADGRG7Q96K78 797 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 MS4A10Q96PG2 267 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 RAB6CQ9H0N0 254 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 LRMDAQ9H2I8 198 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 ANKZF1Q9H8Y5 726 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 UBTD1Q9HAC8 227 aa5.25□□□□□ -1.57
CKS1BP1-201ENST00000555221 A0A0G2JPF8 293 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 EDDM13A0A1B0GTR0 161 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 A0A1W2PRQ8 180 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 OR2M5A3KFT3 312 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 OR5K3A6NET4 321 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 HNRNPCL3B7ZW38 293 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 TBCAO75347 108 aaKnown RBP5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 ALPLP05186 524 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 NGFRP08138 427 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 QDPRP09417 244 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 LINGO3P0C6S8 592 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 HNRNPCL4P0DMR1 293 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 MYOD1P15172 320 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 AMPHP49418 695 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 HTR6P50406 440 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 RAB28P51157 221 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 BRWD1-AS2P59051 145 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 CDK3Q00526 305 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 POU5F1Q01860 360 aaKnown RBP5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 SNTA1Q13424 505 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 TEX38Q6PEX7 206 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 RBPMS2Q6ZRY4 209 aaKnown RBP5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 SLFN11Q7Z7L1 901 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 IQCHQ86VS3 1027 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 SFR1Q86XK3 245 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 VSIG1Q86XK7 387 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 SPATA2LQ8IUW3 424 aaPredicted RBP5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 TTC30BQ8N4P2 665 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 XXYLT1Q8NBI6 393 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 SLC20A1Q8WUM9 679 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 FIG4Q92562 907 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 PHF21AQ96BD5 680 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 BICD1Q96G01 975 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNF479Q96JC4 524 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNF830Q96NB3 372 aaPredicted RBP5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 OR6C1Q96RD1 312 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 NEURL2Q9BR09 285 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 SYT17Q9BSW7 474 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 SEMA6AQ9H2E6 1030 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 GOLPH3LQ9H4A5 285 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 HHATLQ9HCP6 504 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZCCHC17Q9NP64 241 aaKnown RBP5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 TCP11L1Q9NUJ3 509 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 OLAHQ9NV23 265 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 STK26Q9P289 416 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 KCNS2Q9ULS6 477 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 YIPF1Q9Y548 306 aa5.24□□□□□ -1.57
CKS1BP1-201ENST00000555221 MAGEA13PA6NCF6 341 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 SRRM3A6NNA2 597 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 LACTBL1A8MY62 500 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 TMEM178BH3BS89 294 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 DVL1O14640 695 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNHIT1O43257 154 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 FYNP06241 537 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 FAM106CPP0CH98 169 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNF41P51814 821 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNF75DP51815 510 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 SLC20A2Q08357 652 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 RALGDSQ12967 914 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 GTF2H2Q13888 395 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 SF3B4Q15427 424 aaKnown RBP eCLIP5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 LRCH2Q5VUJ6 765 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 GTF2H2CQ6P1K8 395 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 GFRALQ6UXV0 394 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 TMPRSS12Q86WS5 348 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 TMEM219Q86XT9 240 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 KMT5CQ86Y97 462 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms