RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TMEM11P17152 192 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 RPL3P39023 403 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 GARSP41250 739 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 AMTP48728 403 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 METAP2P50579 478 aaKnown RBP eCLIP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 CLCN3P51790 818 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 PGGT1BP53609 377 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 RAD23BP54727 409 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 GALCP54803 685 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 ABATP80404 500 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 TFAP4Q01664 338 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 HYAL1Q12794 435 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 ACVR2BQ13705 512 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 ADIPOQQ15848 244 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 CDONQ4KMG0 1287 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 GGNBP1Q5YKI7 109 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SIGIRRQ6IA17 410 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 JADE1Q6IE81 842 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 TYW3Q6IPR3 259 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 METTL2BQ6P1Q9 378 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 PQLC2Q6ZP29 291 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SZRD1Q7Z422 152 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 ZC3HC1Q86WB0 502 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 C17orf53Q8N3J3 647 aaPredicted RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SPATA6LQ8N4H0 392 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SRBD1Q8N5C6 995 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 AADATQ8N5Z0 425 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 CCDC89Q8N998 374 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 C1orf131Q8NDD1 294 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 PIEZO1Q92508 2521 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 NEUROG1Q92886 237 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 IGSF8Q969P0 613 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 RRNAD1Q96FB5 475 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 CDCA5Q96FF9 252 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 CALML4Q96GE6 196 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 METTL2AQ96IZ6 378 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 PPP1R13BQ96KQ4 1090 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 LRFN5Q96NI6 719 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SMG1Q96Q15 3661 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SEPT5Q99719 369 aaPredicted RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 NUDT16L1Q9BRJ7 211 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 MMTAG2Q9BU76 263 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 MXD3Q9BW11 206 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SF3B5Q9BWJ5 86 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 DCLK3Q9C098 648 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SLCO5A1Q9H2Y9 848 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 ESRP2Q9H6T0 727 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SLC28A3Q9HAS3 691 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 HINT3Q9NQE9 182 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SPTBN2O15020 2390 aa1.53□□□□□ -2.17
PRPF39-208ENST00000554785 SCN5AQ14524 2016 aa1.53□□□□□ -2.17
PRPF39-208ENST00000554785 DUOX1Q9NRD9 1551 aa1.53□□□□□ -2.17
PRPF39-208ENST00000554785 ATXN2Q99700 1313 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 C1orf226A1L170 272 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 IFITM10A6NMD0 228 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 VCYO14598 125 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 AHCYL1O43865 530 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HS6ST1O60243 411 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ZIC3O60481 467 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 JRKO75564 520 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 FTCDO95954 541 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 RB1P06400 928 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HSP90AA1P07900 732 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CSH1P0DML2 217 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CSH2P0DML3 217 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 G6PDP11413 515 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 MYL6BP14649 208 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PORP16435 677 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 DDX5P17844 614 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 GABRB1P18505 474 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 MAOAP21397 527 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CDC25AP30304 524 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 GCH1P30793 250 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HNRNPH1P31943 449 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 STX2P32856 288 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ACTN2P35609 894 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 EIF2S3P41091 472 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 COMPP49747 757 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 MXI1P50539 228 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SNX16P57768 344 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ZBED6P86452 979 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ZXDBP98169 803 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ACSM2AQ08AH3 577 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 Q0VFX4 171 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 EPS8Q12929 822 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 IKQ13123 557 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 IRF3Q14653 427 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TOMM20Q15388 145 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HLFQ16534 295 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 EIF2S3LQ2VIR3 472 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 KRTAP27-1Q3LI81 207 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SOWAHCQ53LP3 525 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TDRD12Q587J7 1177 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PPP6R3Q5H9R7 873 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 RAB41Q5JT25 222 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PLEKHS1Q5SXH7 462 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ACSM2BQ68CK6 577 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 KIAA0930Q6ICG6 404 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 C16orf54Q6UWD8 224 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms