RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 HERPUD2Q9BSE4 406 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 MLPHQ9BV36 600 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 MAK16Q9BXY0 300 aaKnown RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 FAM83DQ9H4H8 585 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 PRDM8Q9NQV8 689 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 SIDT1Q9NXL6 827 aaKnown RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 SCHIP1Q9P0W5 487 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 CPNE7Q9UBL6 633 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 SLC23A2Q9UGH3 650 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 IL17BQ9UHF5 180 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 TMPRSS11EQ9UL52 423 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 NKX2-8O15522 239 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 TTI1O43156 1089 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 GRID2O43424 1007 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 LIASO43766 372 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 NUAK1O60285 661 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 CST8O60676 142 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 PPFIA2O75334 1257 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 DLGAP3O95886 979 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 MX2P20592 715 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 CA4P22748 312 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 MAPK9P45984 424 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 EPHA4P54764 986 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 GFERP55789 205 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 POLE2P56282 527 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 RAB15P59190 212 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 GUCY2DQ02846 1103 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 PTK6Q13882 451 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 DCAF12Q5T6F0 453 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 TTC27Q6P3X3 843 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 BORAQ6PGQ7 559 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 CRTC3Q6UUV7 619 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 NPNTQ6UXI9 565 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 ATG14Q6ZNE5 492 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 B4GALNT4Q76KP1 1039 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 ADGRG6Q86SQ4 1221 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 RFX6Q8HWS3 928 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 CCNYQ8ND76 341 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 SLC35B2Q8TB61 432 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-215ENST00000554656 IMP4Q96G21 291 aaKnown RBP10.42□□□□□ -0.74
SHMT2-215ENST00000554656 SLC45A3Q96JT2 553 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 PLEKHG4BQ96PX9 1271 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 HEMGNQ9BXL5 484 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 ASPSCR1Q9BZE9 553 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 ZMYND15Q9H091 742 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 SLC25A18Q9H1K4 315 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 OR2AG1Q9H205 316 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 RMI1Q9H9A7 625 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 PKD2L2Q9NZM6 624 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 NFKBIL1Q9UBC1 381 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-215ENST00000554656 KLHL3Q9UH77 587 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 SHOC2Q9UQ13 582 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 TMEM184BQ9Y519 407 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-215ENST00000554656 SLC30A1Q9Y6M5 507 aa10.42□□□□□ -0.74
SHMT2-215ENST00000554656 RELNP78509 3460 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 KIR2DS5A0A0G2JLQ3 304 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 A0A0G2JNG1 304 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 RGSL1A5PLK6 1076 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 LILRA5A6NI73 299 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 ZNF891A8MT65 544 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 KIR2DS3K7RE56 304 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 AURKAO14965 403 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 CHUKO15111 745 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 MTX2O75431 263 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 STK17BO94768 372 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 SLC4A1P02730 911 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 PRKAR1AP10644 381 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 SFTPCP11686 197 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 BRAFP15056 766 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 OAS2P29728 719 aaKnown RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 NR2C2P49116 596 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 CLCNKAP51800 687 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 DCDC1P59894 354 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 SLC7A5Q01650 507 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 CDC20Q12834 499 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 KCNAB2Q13303 367 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 XRCC4Q13426 336 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 KIR2DS5Q14953 304 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 NOMO1Q15155 1222 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 OASLQ15646 514 aaKnown RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 PLA2G4EQ3MJ16 856 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 BEND6Q5SZJ8 279 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 ATP1A1-AS1Q5TC04 95 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 KAZNQ674X7 775 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 BZW1Q7L1Q6 419 aaKnown RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 KDELC2Q7Z4H8 507 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 TMC3Q7Z5M5 1100 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 SLC9B2Q86UD5 537 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 PTRH1Q86Y79 214 aaKnown RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 ZNF547Q8IVP9 402 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 NLGN4XQ8N0W4 816 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 CCDC89Q8N998 374 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 NLGN4YQ8NFZ3 816 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 SPATA22Q8NHS9 363 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 ACTL9Q8TC94 416 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 AENQ8WTP8 325 aaKnown RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 C1orf54Q8WWF1 131 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 CAVIN3Q969G5 261 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 OLFM3Q96PB7 478 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms