RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CCDC154A6NI56 674 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 C2CD4BA6NLJ0 364 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 MEI4A8MW99 385 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 H0Y626 953 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 GOLGA8SH3BPF8 625 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 MID1O15344 667 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CLDN11O75508 207 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 GJB3O75712 270 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 HAUS5O94927 633 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 AGFG2O95081 481 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 KCNK5O95279 499 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 MOCS3O95396 460 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CD1AP06126 327 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 TPM2P07951 284 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 RHOCP08134 193 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SERPINF2P08697 491 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 ACADMP11310 421 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 TYRP1P17643 537 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 ACSL1P33121 698 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 PSMD8P48556 350 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 NUMBP49757 651 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CDH4P55283 916 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SNX16P57768 344 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 ST8SIA6P61647 398 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 ECT2LQ008S8 904 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 BNC1Q01954 994 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 ZBTB16Q05516 673 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 DEUP1Q05D60 604 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SULT2A1Q06520 285 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 GRIK2Q13002 908 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SEMA3BQ13214 749 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SLC12A1Q13621 1099 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 IQCB1Q15051 598 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CST6Q15828 149 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CYP2A13Q16696 494 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CCDC14Q49A88 953 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 RABGAP1LQ5R372 815 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 N4BP2L1Q5TBK1 243 aaPredicted RBP4.23□□□□□ -1.73
VTI1B-203ENST00000554636 MANEALQ5VSG8 457 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 DCAF12L1Q5VU92 463 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 DAB2IPQ5VWQ8 1189 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CAVIN1Q6NZI2 390 aaKnown RBP4.23□□□□□ -1.73
VTI1B-203ENST00000554636 MON1BQ7L1V2 547 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 PHLDB2Q86SQ0 1253 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 PIP4P1Q86T03 277 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 FAM131BQ86XD5 332 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 PHF13Q86YI8 300 aaPredicted RBP4.23□□□□□ -1.73
VTI1B-203ENST00000554636 STK40Q8N2I9 435 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 AADATQ8N5Z0 425 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 EMC1Q8N766 993 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 DCAF4L2Q8NA75 395 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 MSANTD4Q8NCY6 345 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 ANKRD20A12PQ8NF67 263 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CADM4Q8NFZ8 388 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 NEK11Q8NG66 645 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 JOSD2Q8TAC2 188 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SLC30A5Q8TAD4 765 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CEP76Q8TAP6 659 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 RXFP2Q8WXD0 754 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 HDAC10Q969S8 669 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 TMEM125Q96AQ2 219 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 COQ10AQ96MF6 247 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CFAP57Q96MR6 1250 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 RPRD1AQ96P16 312 aaPredicted RBP4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SPAG5Q96R06 1193 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 NUP58Q9BVL2 599 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 NUSAP1Q9BXS6 441 aaKnown RBP4.23□□□□□ -1.73
VTI1B-203ENST00000554636 TTYH3Q9C0H2 523 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 C6orf106Q9H6K1 298 aaPredicted RBP4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SGK2Q9HBY8 427 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SERGEFQ9UGK8 458 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SUN2Q9UH99 717 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SLC12A6Q9UHW9 1150 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SLCO3A1Q9UIG8 710 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 PLA2G4CQ9UP65 541 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 TBC1D30Q9Y2I9 924 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 MRFAP1Q9Y605 127 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 TMEM131Q92545 1883 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 SPEGQ15772 3267 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 TRGV11A0A075B6L2 103 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 A0A0D9SEW6 157 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 EDDM13A0A1B0GTR0 161 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 E9PAM4 449 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 FAM72CH0Y354 149 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 RNF103O00237 685 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CCP110O43303 1012 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 HTRA2O43464 458 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SNAP91O60641 907 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ZMPSTE24O75844 475 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ESRRBO95718 433 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SEMA4FO95754 770 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 F9P00740 461 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 DNTTP04053 509 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 IGHV4-34P06331 123 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CTSLP07711 333 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SRCP12931 536 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CD59P13987 128 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 FERP16591 822 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CSRP1P21291 193 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms