RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 ACVR1CQ8NER5 493 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 PPHLN1Q8NEY8 458 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 C1orf216Q8TAB5 229 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 GRIN3AQ8TCU5 1115 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 FRS2Q8WU20 508 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 HMCESQ96FZ2 354 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 GPR22Q99680 433 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 FICDQ9BVA6 458 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 ACE2Q9BYF1 805 aaPredicted RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 C1orf21Q9H246 121 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 RHOJQ9H4E5 214 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 SP110Q9HB58 689 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 FNDC3AQ9Y2H6 1198 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 PCDHGA1Q9Y5H4 931 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 RAI2Q9Y5P3 530 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 PTPRQQ9UMZ3 2332 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 MUC22E2RYF6 1773 aaPredicted RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 CXorf51AA0A1B0GTR3 108 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 TEX51A0A1B0GUA7 166 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 WASH4PA8MWX3 477 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 LIN7AO14910 233 aaPredicted RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 RRP8O43159 456 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 DFNA5O60443 496 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 H2AFYO75367 372 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 ZMPSTE24O75844 475 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 NEBLO76041 1014 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 VAPBO95292 243 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 SEMA4FO95754 770 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 HSPA4LO95757 839 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 AHSGP02765 367 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 PRNPP04156 253 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 HLA-DQB2P05538 268 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 C7P10643 843 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 SAT1P21673 171 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 GABRB3P28472 473 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 ACSL1P33121 698 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 EIF2S3P41091 472 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 POLD2P49005 469 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 PAPOLAP51003 745 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 AFF3P51826 1226 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 SNRPD1P62314 119 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 RAD51Q06609 339 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 SERINC3Q13530 473 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 USP10Q14694 798 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 KPNB1Q14974 876 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 DNAL1Q4LDG9 190 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 ACSBG2Q5FVE4 666 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 ARTNQ5T4W7 220 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 USP30Q70CQ3 517 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 CNTN4Q8IWV2 1026 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 PAF1Q8N7H5 531 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 OR2A12Q8NGT7 310 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 OR14C36Q8NHC7 312 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 FBXO27Q8NI29 283 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 PIP4K2CQ8TBX8 421 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 RDH11Q8TC12 318 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 PTCD2Q8WV60 388 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 WDR60Q8WVS4 1066 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 N4BP2L2Q92802 583 aaPredicted RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 NXPE2Q96DL1 559 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 PPP1R16AQ96I34 528 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 TSNARE1Q96NA8 513 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 FAM129BQ96TA1 746 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 CEP44Q9C0F1 390 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 MIR1-1HGQ9H1L0 117 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 ZDHHC6Q9H6R6 413 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 IL21RQ9HBE5 538 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 SGK2Q9HBY8 427 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 MRM3Q9HC36 420 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 OXSMQ9NWU1 459 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 IL36AQ9UHA7 158 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 IPO11Q9UI26 975 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 MID2Q9UJV3 735 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 LRRC42Q9Y546 428 aa7.19□□□□□ -1.26
RDH11-203ENST00000553384 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.19□□□□□ -1.26
RDH11-203ENST00000553384 NYNRINQ9P2P1 1898 aaKnown RBP7.18□□□□□ -1.26
RDH11-203ENST00000553384 TBC1D3DA0A087WVF3 549 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 TBC1D3IA0A087WXS9 549 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 TBC1D3EA0A087X179 549 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 TBC1D3KA0A087X1G2 549 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 TBC1D3FA6NER0 549 aaPredicted RBP7.18□□□□□ -1.26
RDH11-203ENST00000553384 LRRC72A6NJI9 287 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 TBC1D3LB9A6J9 549 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 F8W8V4 182 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 PMPCBO75439 489 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 TM7SF2O76062 418 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 PSMG1O95456 288 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 PRB1P04280 392 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 C1SP09871 688 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 TBC1D3HP0C7X1 549 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 COL6A2P12110 1019 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 ARCN1P48444 511 aaKnown RBP7.18□□□□□ -1.26
RDH11-203ENST00000553384 PTDSS1P48651 473 aaKnown RBP7.18□□□□□ -1.26
RDH11-203ENST00000553384 CCNHP51946 323 aaPredicted RBP7.18□□□□□ -1.26
RDH11-203ENST00000553384 RHOAP61586 193 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 MXRA7P84157 204 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 BNC1Q01954 994 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 CTBP1Q13363 440 aa7.18□□□□□ -1.26
RDH11-203ENST00000553384 THOC5Q13769 683 aaKnown RBP7.18□□□□□ -1.26
RDH11-203ENST00000553384 TEAD4Q15561 434 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms