RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 MGAT4DA6NG13 374 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 EFCAB8A8MWE9 144 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 F8W8V4 182 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 TCEA3O75764 348 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 URI1O94763 535 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 EML2O95834 649 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 IDSP22304 550 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 PBLDP30039 288 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 NSG1P42857 185 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 GPR3P46089 330 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 TTPAP49638 278 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 TUBB2AQ13885 445 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 DNAJC21Q5F1R6 531 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 CDCP2Q5VXM1 449 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 HIBCHQ6NVY1 386 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 IYDQ6PHW0 289 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 SLC9B2Q86UD5 537 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 CCNJLQ8IV13 435 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 AGGF1Q8N302 714 aaeCLIP11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 ARL14Q8N4G2 192 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 OR2L2Q8NH16 312 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 HM13Q8TCT9 377 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 SLC37A2Q8TED4 501 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 SGF29Q96ES7 293 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 TUBB2BQ9BVA1 445 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 SARS2Q9NP81 518 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 PRDM8Q9NQV8 689 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 LRIT1Q9P2V4 623 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 RABGEF1Q9UJ41 708 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 KLK13Q9UKR3 277 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 FREM2Q5SZK8 3169 aa11.51□□□□□ -0.57
TRAFD1-209ENST00000552896 IGF2RP11717 2491 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 WDFY3Q8IZQ1 3526 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 C17orf113A0A1B0GUU1 675 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 RHPN2P1A8MT19 583 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 PDZK1P1A8MUH7 402 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 D6RAR5 112 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 NTN3O00634 580 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 CD3EAPO15446 510 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ZW10O43264 779 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 RAD51CO43502 376 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 SNX2O60749 519 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 POP7O75817 140 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 USP1O94782 785 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 VAPBO95292 243 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 TOP3BO95985 862 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 FTH1P02794 183 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 PGAM1P18669 254 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 OGNP20774 298 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 RPL21P46778 160 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ITGA8P53708 1063 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 UBE2IP63279 158 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 HHEXQ03014 270 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 BIRC2Q13490 618 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 NFE2L1Q14494 772 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 SEMA3AQ14563 771 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 HIF1AQ16665 826 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 TYSND1Q2T9J0 566 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ZNF658BQ4V348 819 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 RNF187Q5TA31 235 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 MRNIPQ6NTE8 343 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ABRAXAS1Q6UWZ7 409 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 TMEM135Q86UB9 458 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 BEND7Q8N7W2 519 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 DCBLD1Q8N8Z6 715 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 BBOF1Q8ND07 529 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ZNF592Q92610 1267 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ZNF669Q96BR6 464 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 STAMBPL1Q96FJ0 436 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 SIGLEC10Q96LC7 697 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 DEPDC7Q96QD5 511 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 NAT9Q9BTE0 207 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ABCG4Q9H172 646 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 POT1Q9NUX5 634 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 MARCH4Q9P2E8 410 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ANAPC5Q9UJX4 755 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 MSRB2Q9Y3D2 182 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 MAD1L1Q9Y6D9 718 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 RPS6KL1Q9Y6S9 549 aa11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 TPRP12270 2363 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-209ENST00000552896 ZCWPW2A0A1B0GU75 182 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 LILRA5A6NI73 299 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 TP73O15350 636 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 TTC4O95801 387 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 RPLP0P05388 317 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 BRAFP15056 766 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 XRCC1P18887 633 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 RPL10P27635 214 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 HALP42357 657 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 ARCN1P48444 511 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 DRG2P55039 364 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 SPIDRQ14159 915 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 SEPT7Q16181 437 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 CLPPQ16740 277 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 ANKRD20A4Q4UJ75 823 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 METRNLQ641Q3 311 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 CES3Q6UWW8 571 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 XKR5Q6UX68 686 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms