RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 FBXO43Q4G163 708 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 AARS2Q5JTZ9 985 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 C1orf220Q5T0J3 134 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 SDHAF4Q5VUM1 108 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ATG16L1Q676U5 607 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM215Q68D42 235 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM88Q6PEY1 159 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF720Q7Z2F6 126 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PEG10Q86TG7 708 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 MARCH9Q86YJ5 346 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 FAM217AQ8IXS0 508 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ZC3H3Q8IXZ2 948 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PDCL2Q8N4E4 241 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CHCHD4Q8N4Q1 142 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 NECAB1Q8N987 351 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 SRFBP1Q8NEF9 429 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 OR52L2PQ8NGH6 319 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ACTRT2Q8TDY3 377 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM174Q8WUU8 243 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 RLN3Q8WXF3 142 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 NPIPB3Q92617 1050 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 HTRA1Q92743 480 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 HDAC2Q92769 488 aaKnown RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 KIFAP3Q92845 792 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ARRDC3Q96B67 414 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 KTI12Q96EK9 354 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 WDYHV1Q96HA8 205 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 HS6ST2Q96MM7 605 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CAMK1GQ96NX5 476 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PGLYRP2Q96PD5 576 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 LENG8Q96PV6 779 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TWNKQ96RR1 684 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TSPAN18Q96SJ8 248 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ACOX2Q99424 681 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ACBD6Q9BR61 282 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 REEP2Q9BRK0 252 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 FSD1LQ9BXM9 530 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 KRTAP3-1Q9BYR8 98 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 GPR63Q9BZJ6 419 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 FOXP1Q9H334 677 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PRORYQ9H606 182 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 MMRN2Q9H8L6 949 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 EBF2Q9HAK2 575 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PLEKHA2Q9HB19 425 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 IL21RQ9HBE5 538 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PDE11AQ9HCR9 933 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 PREBQ9HCU5 417 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 KCNK9Q9NPC2 374 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 SLC38A7Q9NVC3 462 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM160Q9NX00 188 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 OSER1Q9NX31 292 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ORC3Q9UBD5 711 aaPredicted RBP2.45□□□□□ -2.02
CPSF6-207ENST00000551516 GMEB2Q9UKD1 530 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 CLEC4EQ9ULY5 219 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 MMP17Q9ULZ9 603 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 DNAJC16Q9Y2G8 782 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 C2CD2Q9Y426 696 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 NFE2L3Q9Y4A8 694 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 OTOGQ6ZRI0 2925 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 COL6A6A6NMZ7 2263 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 FBN2P35556 2912 aa2.45□□□□□ -2.02
CPSF6-207ENST00000551516 ITIH6Q6UXX5 1313 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 AHCTF1Q8WYP5 2266 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SPAG17Q6Q759 2223 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CELSR2Q9HCU4 2923 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 MYH9P35579 1960 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 LY6G6EA0A0G2JKS1 128 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 VWA3AA6NCI4 1184 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM191CA6NGB0 347 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 LINC00473A8K010 186 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 KCNJ18B7U540 433 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 C1QTNF3-AMACRE9PGA6 284 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 H0YIZ8 118 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 OGTO15294 1046 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SLC16A4O15374 487 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 TGFB1I1O43294 461 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 TRAPPC3O43617 180 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 TLX3O43711 291 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 NEMFO60524 1076 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ATP2C2O75185 946 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 GUCY1B2O75343 617 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 BEST1O76090 585 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 RHOBTB3O94955 611 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 APBB3O95704 486 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PENKP01210 267 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ALDOAP04075 364 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PRB1P04280 392 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ADH4P08319 380 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SERPINF2P08697 491 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 OR52Z1P0C646 297 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF883P0CG24 379 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 MCM7P33993 719 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 GALNSP34059 522 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PSMC2P35998 433 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PNPLA4P41247 253 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CASP2P42575 452 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 COPB1P53618 953 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PEX3P56589 373 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 OSTNP61366 133 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 NOP14P78316 857 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms