RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 GALNT4Q8N4A0 578 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 CPA6Q8N4T0 437 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PACRGLQ8N7B6 248 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TRIML2Q8N7C3 387 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 C16orf52Q8NHV5 167 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 LMO3Q8TAP4 145 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PNPT1Q8TCS8 783 aaKnown RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 ACMSDQ8TDX5 336 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 SLC26A7Q8TE54 656 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PPP4R1Q8TF05 950 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TRUB1Q8WWH5 349 aaKnown RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 SLC44A1Q8WWI5 657 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 XAGE5Q8WWM1 108 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PRPF31Q8WWY3 499 aaKnown RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 SHC3Q92529 594 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 ATP2A3Q93084 1043 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 CNDP1Q96KN2 507 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 C9orf72Q96LT7 481 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 SNX18Q96RF0 628 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PAFAH2Q99487 392 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 DOK1Q99704 481 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TUBA1CQ9BQE3 449 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 REEP2Q9BRK0 252 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 RTKNQ9BST9 563 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 C1orf50Q9BV19 199 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 MAK16Q9BXY0 300 aaKnown RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 SLC2A11Q9BYW1 496 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PDZD7Q9H5P4 517 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PSTPIP2Q9H939 334 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 CLK4Q9HAZ1 481 aaKnown RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PARVGQ9HBI0 331 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TRPC7Q9HCX4 862 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TUFT1Q9NNX1 390 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PNPLA8Q9NP80 782 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 UBE2TQ9NPD8 197 aaPredicted RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 FBXO6Q9NRD1 293 aaPredicted RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 AGPAT3Q9NRZ7 376 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PNPLA3Q9NST1 481 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 DDX18Q9NVP1 670 aaKnown RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 QPCTLQ9NXS2 382 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 DDX56Q9NY93 547 aaKnown RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TMOD3Q9NYL9 352 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TAS2R14Q9NYV8 317 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TMOD2Q9NZR1 351 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 TBC1D7Q9P0N9 293 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 CDH22Q9UJ99 828 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 GRID1Q9ULK0 1009 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 NDRG4Q9ULP0 352 aaKnown RBP3.31□□□□□ -1.88
CCNT1-203ENST00000550457 GABRQQ9UN88 632 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 PLLPQ9Y342 182 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 SNX9Q9Y5X1 595 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 MYH2Q9UKX2 1941 aa3.31□□□□□ -1.88
CCNT1-203ENST00000550457 UBR2Q8IWV8 1755 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 ADAMTSL3P82987 1691 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 PLIN4Q96Q06 1357 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 hCG_2014768A0A024R1R8 64 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 FAM237BA0A1B0GVD1 139 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 A0A1W2PPM1 405 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 DENND3A2RUS2 1198 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 TRIM64A6NGJ6 449 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 CENPBD1B2RD01 187 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 E9PMD0 336 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 H3BNH8 94 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 H3BSA7 217 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 ZBTB5O15062 677 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 IDH3BO43837 385 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 SNAP91O60641 907 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 KLHL41O60662 606 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 NOL3O60936 208 aaKnown RBP3.3□□□□□ -1.88
CCNT1-203ENST00000550457 SULT1C4O75897 302 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 USP1O94782 785 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 TOMM70O94826 608 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 OR6B1O95007 311 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 PGM3O95394 542 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 TDP2O95551 362 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 MCF2P10911 925 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 RALAP11233 206 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 PRF1P14222 555 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 CYP11B1P15538 503 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 HDCP19113 662 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 JAK1P23458 1154 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 PEX2P28328 305 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 HOXD9P28356 352 aaPredicted RBP3.3□□□□□ -1.88
CCNT1-203ENST00000550457 CIITAP33076 1130 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 TCF7P36402 384 aaPredicted RBP3.3□□□□□ -1.88
CCNT1-203ENST00000550457 PCYT1AP49585 367 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 GPC3P51654 580 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 ARSEP51690 589 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 VAMP7P51809 220 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 MAP2K6P52564 334 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 HNRNPFP52597 415 aaKnown RBP3.3□□□□□ -1.88
CCNT1-203ENST00000550457 AQP5P55064 265 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 TPTEP56180 551 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 RPS3AP61247 264 aaKnown RBP3.3□□□□□ -1.88
CCNT1-203ENST00000550457 DYNLL1P63167 89 aaKnown RBP3.3□□□□□ -1.88
CCNT1-203ENST00000550457 HTRA4P83105 476 aaPredicted RBP3.3□□□□□ -1.88
CCNT1-203ENST00000550457 FMO1Q01740 532 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 GCNT1Q02742 428 aa3.3□□□□□ -1.88
CCNT1-203ENST00000550457 KDSRQ06136 332 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms